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BaseInfo

ncRNA ID	novel_gma_miR608
Species	Glycine max
Class	miRNA
Genome position	Chr6:11459827-11460008 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451632;SRR1451637
Length	21
Mature sequence(if miRNA)	162 - AGGAGCUUCCUUCAGCCCAUG - 182
Stem-loop(if miRNA)	--          -     C   U       UUC     AUUAAA    U  U        UG   AC           CAC   G  C     GCU   AGGAGCUUCC UUCAG CCA GCAUGGA   AAGGG      GGGU GC GGAGUAUC  CUG  UCAUUCAUACA   ACA UA GUAGU   U   |||||||||| ||||| ||| |||||||   |||||      |||| || ||||||||  |||  |||||||||||   ||| || |||||   UCCUCGAGGG AAGUC GGU CGUGUCU   UUCUC      CCCA CG UUUUAUAG  GAC  AGUAAGUGUGU   UGU AU CGUUA   U CU          G     A   U       CUU     ------    -  -        UG   GA           UAA   G  -     AAC
Stem-loop sequence	AGGAGCUUCCUUCAGCCCAUGCAUGGAUUCAAGGGAUUAAAGGGUUGCUGGAGUAUCUGCUGACUCAUUCAUACACACACAGUACGUAGUGCUUUCAAAUUGCUAGUGUAAUUGUGUGAAUGAAGCAGGUGAUAUUUUGCACCCCUCUUUUCUCUGUGCUUGGACUGAAGGGGAGCUCCUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI410474.1	ncRNA:21   GUACCCGACUUCCUUCGAGGA   1   *|||||||||=|||||||||| targets:174   AAUGGGCUGAGGGAAGCUCCU   194 Target Full Sequence	1.5	Sequence 8599 from Patent EP2074227	NA	coding protein	psRNATarget
JB170935.1	ncRNA:21   GUACCCGACUUCCUUCGAGGA   1   *|||||||||=|||||||||| targets:174   AAUGGGCUGAGGGAAGCUCCU   194 Target Full Sequence	1.5	Sequence 8599 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242604.1	ncRNA:21   GUACCCGACUUCCUUCGAGGA   1   *|||||||||=|||||||||| targets:174   AAUGGGCUGAGGGAAGCUCCU   194 Target Full Sequence	1.5	Sequence 8599 from Patent EP2985353	NA	coding protein	psRNATarget
XM_003544803.3	ncRNA:21   GUACCCGACUUCCUUCGAGGA   1   *|||||||||=|||||||||| targets:77   AAUGGGCUGAGGGAAGCUCCU   97 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100819717 (LOC100819717), mRNA	uncharacterized LOC100819717(LOC100819717)	coding protein	psRNATarget
BT098668.1	ncRNA:21   GUACCCGACUUCCUUCGAGGA   1   *|||||||||=|||||||||| targets:441   AAUGGGCUGAGGGAAGCUCCU   461 Target Full Sequence	1.5	Soybean clone JCVI-FLGm-12F22 unknown mRNA	NA	coding protein	psRNATarget
XM_003529485.3	ncRNA:21   GUACCCGACUUCCUUCGAGGA   1   =|||||=||||||||||||*| targets:427   UAUGGGUUGAAGGAAGCUCGU   447 Target Full Sequence	2.5	PREDICTED: Glycine max outer envelope pore protein 16-2, chloroplastic-like (LOC100808144), mRNA	outer envelope pore protein 16-2, chloroplastic-like(LOC100808144)	coding protein	psRNATarget
JB170901.1	ncRNA:21   GUACCCGACUUCCUUCGAGGA   1   =*|||*|||||||=||||||| targets:60   UUUGGACUGAAGGGAGCUCCU   80 Target Full Sequence	2.5	Sequence 8565 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242570.1	ncRNA:21   GUACCCGACUUCCUUCGAGGA   1   =*|||*|||||||=||||||| targets:60   UUUGGACUGAAGGGAGCUCCU   80 Target Full Sequence	2.5	Sequence 8565 from Patent EP2985353	NA	coding protein	psRNATarget
HI410440.1	ncRNA:21   GUACCCGACUUCCUUCGAGGA   1   =*|||*|||||||=||||||| targets:60   UUUGGACUGAAGGGAGCUCCU   80 Target Full Sequence	2.5	Sequence 8565 from Patent EP2074227	NA	coding protein	psRNATarget