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BaseInfo

ncRNA ID	novel_gma_miR605
Species	Glycine max
Class	miRNA
Genome position	Chr5:38982171-38982259 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451632;SRR1451633;SRR1451635;SRR1451640;SRR1451641;SRR1451644;SRR1451607;SRR1451625
Length	21
Mature sequence(if miRNA)	69 - CCAUUAGCUAAUUUGUAGAAG - 89
Stem-loop(if miRNA)	--            UUG   AA  GCUCUC U   A      UAA   CCAUUAGCUAAU   UAG  GA      G AUA CUUCUC   A   ||||||||||||   |||  ||      | ||| ||||||   GGUAAUCGAUUG   GUC  UU      C UAU GGAGAG   A GA            UCA   GA  AUACCU -   A      UAG
Stem-loop sequence	CCAUUAGCUAAUUUGUAGAAGAGCUCUCGUAUAACUUCUCUAAAAGAUGAGAGGAUAUCUCCAUAUUAGCUGACUGUUAGCUAAUGGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014763080.1	ncRNA:21   GAAGAUGUUUAAUCGAUUACC   1   ||||||||||||||||||||| targets:3634   CUUCUACAAAUUAGCUAAUGG   3654 Target Full Sequence	0.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X6, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763076.1	ncRNA:21   GAAGAUGUUUAAUCGAUUACC   1   ||||||||||||||||||||| targets:3739   CUUCUACAAAUUAGCUAAUGG   3759 Target Full Sequence	0.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X2, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763077.1	ncRNA:21   GAAGAUGUUUAAUCGAUUACC   1   ||||||||||||||||||||| targets:3870   CUUCUACAAAUUAGCUAAUGG   3890 Target Full Sequence	0.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X3, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763079.1	ncRNA:21   GAAGAUGUUUAAUCGAUUACC   1   ||||||||||||||||||||| targets:3882   CUUCUACAAAUUAGCUAAUGG   3902 Target Full Sequence	0.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X5, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763075.1	ncRNA:21   GAAGAUGUUUAAUCGAUUACC   1   ||||||||||||||||||||| targets:3971   CUUCUACAAAUUAGCUAAUGG   3991 Target Full Sequence	0.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_006603606.2	ncRNA:21   GAAGAUGUUUAAUCGAUUACC   1   =|||||||||||||||||||| targets:1531   UUUCUACAAAUUAGCUAAUGG   1551 Target Full Sequence	0.0	PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X1, mRNA	uncharacterized LOC100500460(LOC100500460)	coding protein	psRNATarget
XM_006603608.2	ncRNA:21   GAAGAUGUUUAAUCGAUUACC   1   =|||||||||||||||||||| targets:1541   UUUCUACAAAUUAGCUAAUGG   1561 Target Full Sequence	0.0	PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X3, mRNA	uncharacterized LOC100500460(LOC100500460)	coding protein	psRNATarget
XM_003525187.3	ncRNA:21   GAAGAUGUUUAAUCGAUUACC   1   |*||||||||||||||||||* targets:1910   CAUCUACAAAUUAGCUAAUGA   1930 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100801179 (LOC100801179), mRNA	uncharacterized LOC100801179(LOC100801179)	coding protein	psRNATarget