ncRNA ID | novel_gma_miR578 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:49087610-49087746 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451632 |
Length | 24 |
Mature sequence(if miRNA) | 114 - AACCCAUAUGGAUUGGCAGUCCGU - 137 |
Stem-loop(if miRNA) |
--               GC    C   G     ---UUUU        -        UUUUUGCUAUA   A   AACCCAUAUGGAUUG  AGUC GUA GGGUU       UUUUAAAA AAAAAGAU           UGG C   |||||||||||||||  |||| ||| |||||       |||||||| ||||||||           |||   UUGGGUAUGCCUGAC  UUAG CAU CCCAA       AAAAUUUU UUUUUCUG           ACC G UU               GA    A   A     UUUUUUU        G        ---UAUCCCUA   A |
Stem-loop sequence | AACCCAUAUGGAUUGGCAGUCCGUAGGGGUUUUUUUUUUAAAAAAAAAGAUUUUUUGCUAUAUGGACGACCAAUCCCUAUGUCUUUUUGUUUUAAAAUUUUUUUAACCCAUACAGAUUAGCAGUCCGUAUGGGUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT098305.1 |
|
3.0 | Soybean clone JCVI-FLGm-23G3 unknown mRNA | NA | coding protein | psRNATarget |