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BaseInfo

ncRNA ID novel_gma_miR569
Species Glycine max
Class miRNA
Genome position Chr10:9507140-9507187 [+]
Reference genome Glycine_max_v2.0
Source SRR1451632
Length 21
Mature sequence(if miRNA) 1 - UUAGUUCCUGAGAUUGUACCC - 21
Stem-loop(if miRNA) --      CCU     ---     CC
  UUAGUU   GAGAU   UGUAC  A
  ||||||   |||||   |||||  U
  AAUUAA   CUCUG   AUAUG  U
UA      --U     AUU     UU
Stem-loop sequence UUAGUUCCUGAGAUUGUACCCAUUUUGUAUAUUAGUCUCUAAUUAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014769769.1
ncRNA:21   CCCAUGUUAGAGUCCUUGAUU   1
  ||*||||||||||||=|||||
targets:5320   GGUUACAAUCUCAGGGACUAA   5340

2.5 PREDICTED: Glycine max uncharacterized LOC102668781 (LOC102668781), transcript variant X1, mRNA uncharacterized LOC102668781(LOC102668781) coding protein psRNATarget
XM_006592573.2
ncRNA:21   CCCAUGUUAGAGUCCUUGAUU   1
  |*||=||||||||||=|||||
targets:32   GAGUGCAAUCUCAGGGACUAA   52

2.5 PREDICTED: Glycine max uncharacterized LOC102662396 (LOC102662396), mRNA uncharacterized LOC102662396(LOC102662396) coding protein psRNATarget