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BaseInfo

ncRNA ID novel_gma_miR568
Species Glycine max
Class miRNA
Genome position Chr16:3757830-3757973 [-]
Reference genome Glycine_max_v2.0
Source SRR1451632
Length 19
Mature sequence(if miRNA) 126 - CAUUUUUCUGUUGUGUGCU - 144
Stem-loop(if miRNA) --       C      --------G    --AG U   -UU     UAU  UU    GUUAAA     AAGUGAUACAA
  CAUUUUU UGUUGU         UGCU    C CUG   CUUAC   UG  UCAU      GUGUU           U
  ||||||| ||||||         ||||    | |||   |||||   ||  ||||      |||||           U
  GUAAGGA GCGACA         ACGA    G GAC   GAAUG   AU  GGUA      GACGA           G
UC       U      GGAAAUAAA    GAAA U   UUU     UUU  UU    ----AC     GUACUCCUUUC
Stem-loop sequence CAUUUUUCUGUUGUGUGCUAGCUCUGUUCUUACUAUUGUUUCAUGUUAAAGUGUUAAGUGAUACAAUUGCUUUCCUCAUGAGCAGCAAUGGUUUAUUUGUAAGUUUCAGUGAAAGAGCAAAAUAAAGGACAGCGUAGGAAUGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003529957.3
ncRNA:19   UCGUGUGUUGUCUUUUUAC   1
  ||||*||||||*|||||||
targets:3   AGCAAACAACAAAAAAAUG   21

2.5 PREDICTED: Glycine max cytochrome P450 CYP736A12-like (LOC100781782), mRNA cytochrome P450 CYP736A12-like(LOC100781782) coding protein psRNATarget