ncRNA ID | novel_gma_miR567 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:5522962-5523114 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451632;SRR1451645;SRR1451619 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CCAAUAACUGAUUUGUCACCUG - 22 |
Stem-loop(if miRNA) |
--                  U       AA        -CG                   UUCC    C   GG   U   GGUGACAAAUCAGUUAUU GGAAAAA  AUUUCUCA   UUGCACAGUUUUUUUUUUU    AUUA UUG  GAA C   |||||||||||||||||| |||||||  ||||||||   |||||||||||||||||||    |||| |||  |||   CCACUGUUUAGUCAAUAA CCUUUUU  UAAAGAGU   AACGUGUCAAAAAAAAAAA    UAGU AAC  UUU G GU                  C       GC        UGA                   --UA    C   UU   A |
Stem-loop sequence | GGUGACAAAUCAGUUAUUUGGAAAAAAAAUUUCUCACGUUGCACAGUUUUUUUUUUUUUCCAUUACUUGGGGAAUCGAUUUUUCAACUGAUAUAAAAAAAAAAACUGUGCAAAGUUGAGAAAUCGUUUUUCCCAAUAACUGAUUUGUCACCUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014765688.1 |
|
2.5 | PREDICTED: Glycine max mitochondrial inner membrane protease subunit 1-like (LOC100818627), transcript variant X3, mRNA | mitochondrial inner membrane protease subunit 1-like(LOC100818627) | coding protein | psRNATarget |