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BaseInfo

ncRNA ID novel_gma_miR567
Species Glycine max
Class miRNA
Genome position Chr16:5522962-5523114 [-]
Reference genome Glycine_max_v2.0
Source SRR1451632;SRR1451645;SRR1451619
Length 22
Mature sequence(if miRNA) 1 - CCAAUAACUGAUUUGUCACCUG - 22
Stem-loop(if miRNA) --                  U       AA        -CG                   UUCC    C   GG   U
  GGUGACAAAUCAGUUAUU GGAAAAA  AUUUCUCA   UUGCACAGUUUUUUUUUUU    AUUA UUG  GAA C
  |||||||||||||||||| |||||||  ||||||||   |||||||||||||||||||    |||| |||  |||
  CCACUGUUUAGUCAAUAA CCUUUUU  UAAAGAGU   AACGUGUCAAAAAAAAAAA    UAGU AAC  UUU G
GU                  C       GC        UGA                   --UA    C   UU   A
Stem-loop sequence GGUGACAAAUCAGUUAUUUGGAAAAAAAAUUUCUCACGUUGCACAGUUUUUUUUUUUUUCCAUUACUUGGGGAAUCGAUUUUUCAACUGAUAUAAAAAAAAAAACUGUGCAAAGUUGAGAAAUCGUUUUUCCCAAUAACUGAUUUGUCACCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014765688.1
ncRNA:22   GUCCACUGUUUAGUCAAUAACC   1
  **|||*||||*|||||||||||
targets:328   ACGGUUACAAUUCAGUUAUUGG   349

2.5 PREDICTED: Glycine max mitochondrial inner membrane protease subunit 1-like (LOC100818627), transcript variant X3, mRNA mitochondrial inner membrane protease subunit 1-like(LOC100818627) coding protein psRNATarget