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BaseInfo

ncRNA ID	novel_gma_miR565
Species	Glycine max
Class	miRNA
Genome position	Chr15:13009305-13009513 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451632
Length	24
Mature sequence(if miRNA)	1 - UAAUAACCGUCUUUGAAUGUAGGA - 24
Stem-loop(if miRNA)	--U                   --AG  -  --CUUU                  A        C    U     AUG  A  GUU    -                U    AAUAACCGUCUUUGAAUGU    GA AC      CAAAGACGGUUAUUAACU AUAACCGU UUUG AUGCU   UC GA   UACA UUCAAAGACGGUUAUU G    |||||||||||||||||||    || ||      |||||||||||||||||| |||||||| |||| |||||   || ||   |||| ||||||||||||||||    UUAUUGGCAGAAACUUACA    CU UG      GUUUCUGCCAAUAAUUGA UAUUGGCA AAAC UACGG   AG CU   GUGU AAGUUUCUGCCAAUAA U CGU                   GAGA  A  UUGUAU                  G        A    U     AUA  A  -GU    U                U
Stem-loop sequence	UAAUAACCGUCUUUGAAUGUAGGAACCUUUCAAAGACGGUUAUUAACUAAUAACCGUCUUUGUAUGCUAUGUCAGAGUUUACAUUCAAAGACGGUUAUUUGUUAAUAACCGUCUUUGAAUUGUGUGUCAGAAUAGGCAUUCAAAAACGGUUAUGAGUUAAUAACCGUCUUUGUAUGUUGUAUCAGAGACAUUCAAAGACGGUUAUUUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014775607.1	ncRNA:24   AGGAUGUAAGUUUCUGCCAAUAAU   1   **|*|||||||||||||||||||| targets:1539   AGCAACAUUCAAAGACGGUUAUUA   1562 Target Full Sequence	0.0	PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA	protein MOR1(LOC102659664)	coding protein	psRNATarget
XM_014775607.1	ncRNA:24   AGGAUGUAAGUUUCUGCCAAUAAU   1   **=*|||||||||||||||||||| targets:1484   CAUAACAUUCAAAGACGGUUAUUA   1507 Target Full Sequence	0.0	PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA	protein MOR1(LOC102659664)	coding protein	psRNATarget
XM_014775607.1	ncRNA:24   AGGAUGUAAGUUUCUGCCAAUAAU   1   **=*||||||||||=||||||||| targets:1594   CAUAACAUUCAAAGGCGGUUAUUA   1617 Target Full Sequence	1.5	PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA	protein MOR1(LOC102659664)	coding protein	psRNATarget
XM_003534913.2	ncRNA:24   AGGAUGUAAGUUUCUGCCAAUAAU   1   |=*||*=||||||||||||||||* targets:133   UUGUAAGUUCAAAGACGGUUAUUU   156 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100781107 (LOC100781107), mRNA	uncharacterized LOC100781107(LOC100781107)	coding protein	psRNATarget
XM_006599236.2	ncRNA:24   AGGAUGUAAGUUUCUGCCAAUAAU   1   *=**|||||=*||||||||||||= targets:475   AUACACAUUUUAAGACGGUUAUUG   498 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100788736 (LOC100788736), transcript variant X1, mRNA	uncharacterized LOC100788736(LOC100788736)	coding protein	psRNATarget