ncRNA ID | novel_gma_miR563 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:18902764-18902916 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294478;SRR1451650;SRR1292924;SRR1294474 |
Length | 21 |
Mature sequence(if miRNA) | 133 - UCUCUCUGAAAUCUUCGACCU - 153 |
Stem-loop(if miRNA) |
--                      A          C           U   --GA   A   GA   C ----ACC   U   UCUCUCUGAAAUCUUCGACCUC UCAACGAUGA GAUUUAAAGUC UCU    UGA GAA  CCU G       GCU C   |||||||||||||||||||||| |||||||||| ||||||||||| |||    ||| |||  ||| |       |||   AGAGAGACUUUAGAAGCUGGAG AGUUGCUACU CUAAAUUUCAG AGA    GCU CUU  GGA C       CGA A AC                      C          U           U   AGCA   -   AA   A GAAACAA   A |
Stem-loop sequence | UCUCUCUGAAAUCUUCGACCUCAUCAACGAUGACGAUUUAAAGUCUUCUGAUGAAGAAGACCUCGACCGCUUCAAAGCAACAAAGCAAGGAAUUCUCGACGAAGAUGACUUUAAAUCUUCAUCGUUGACGAGGUCGAAGAUUUCAGAGAGACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003523708.3 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100782614 (LOC100782614), mRNA | uncharacterized LOC100782614(LOC100782614) | coding protein | psRNATarget |