| ncRNA ID | bra-miR172d-5p |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | chrA3:4762900-4762994 [-] |
| Reference genome | Brapa_1.1 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 64 - GCAGCAUCAUUAAGAUUCACA - 84 |
| Stem-loop(if miRNA) |
A A A U UUUU UAGUUGC GAUGCAGCAUCAUUAAGAUUC CAAGAG UG GG C ||||||| ||||||||||||||||||||| |||||| || || U AUCAACG CUACGUCGUAGUAGUUCUAAG GUUCUC GC CU U A G C U UUUG |
| Stem-loop sequence | UAGUUGCAGAUGCAGCAUCAUUAAGAUUCACAAGAGAUGUGGUUUUCUUGUUUUCUCGCCUCUUGGGAAUCUUGAUGAUGCUGCAUCAGCAACUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009128446.2 |
|
2.5 | PREDICTED: Brassica rapa uncharacterized LOC103851575 (LOC103851575), mRNA | uncharacterized LOC103851575(LOC103851575) | coding protein | psRNATarget |
| 1 | PMID:24559317
"Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis"; Jiang J, Lv M, Liang Y, Ma Z, Cao J; BMC Genomics. 15:146(2014). |