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BaseInfo

ncRNA ID novel_gma_miR542
Species Glycine max
Class miRNA
Genome position Chr4:6952609-6952761 [+]
Reference genome Glycine_max_v2.0
Source SRR1294478;SRR2045230;SRR2045231;SRR2045232;SRR1295522
Length 25
Mature sequence(if miRNA) 129 - UAAGGAUUUAAAAAGGUAAGGGACU - 153
Stem-loop(if miRNA) --    -G      C              GUC   A   AA      UA        C   A     UUCUACU   UUU
  UCCC  ACUUUU UAAAUCCUUAUUUA   UCU ACU  GCAAAA  UUAUUCAC UUA UCCUU       UCA   U
  ||||  |||||| ||||||||||||||   ||| |||  ||||||  |||||||| ||| |||||       |||
  AGGG  UGGAAA AUUUAGGAAUAAAU   GGA UGA  CGUUUU  AGUAAGUG AAU AGGAA       AGU   U
UC    AA      A              ---   C   AA      UG        A   C     ---UUAU   UAC
Stem-loop sequence UCCCGACUUUUCUAAAUCCUUAUUUAGUCUCUAACUAAGCAAAAUAUUAUUCACCUUAAUCCUUUUCUACUUCAUUUUUCAUUGAUAUUAAGGACUAAAGUGAAUGAGUUUUUGCAAAGUCAGGUAAAUAAGGAUUUAAAAAGGUAAGGGACU