ncRNA ID | novel_gma_miR542 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:6952609-6952761 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294478;SRR2045230;SRR2045231;SRR2045232;SRR1295522 |
Length | 25 |
Mature sequence(if miRNA) | 129 - UAAGGAUUUAAAAAGGUAAGGGACU - 153 |
Stem-loop(if miRNA) |
--    -G      C              GUC   A   AA      UA        C   A     UUCUACU   UUU   UCCC  ACUUUU UAAAUCCUUAUUUA   UCU ACU  GCAAAA  UUAUUCAC UUA UCCUU       UCA   U   ||||  |||||| ||||||||||||||   ||| |||  ||||||  |||||||| ||| |||||       |||   AGGG  UGGAAA AUUUAGGAAUAAAU   GGA UGA  CGUUUU  AGUAAGUG AAU AGGAA       AGU   U UC    AA      A              ---   C   AA      UG        A   C     ---UUAU   UAC |
Stem-loop sequence | UCCCGACUUUUCUAAAUCCUUAUUUAGUCUCUAACUAAGCAAAAUAUUAUUCACCUUAAUCCUUUUCUACUUCAUUUUUCAUUGAUAUUAAGGACUAAAGUGAAUGAGUUUUUGCAAAGUCAGGUAAAUAAGGAUUUAAAAAGGUAAGGGACU |