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BaseInfo

ncRNA ID novel_gma_miR532
Species Glycine max
Class miRNA
Genome position Chr10:19260614-19260664 [+]
Reference genome Glycine_max_v2.0
Source SRR1451631;SRR1451640;SRR1451647;SRR1451613;SRR1451616
Length 22
Mature sequence(if miRNA) 30 - CGAGGACUCCUUUAAAUAGACU - 51
Stem-loop(if miRNA) --A    C      -  G    ACAA
   CUAU UGAAGG GU CCUC    A
   |||| |||||| || ||||    G
   GAUA AUUUCC CA GGAG    G
UCA    A      U  -    CAAG
Stem-loop sequence ACUAUCUGAAGGGUGCCUCACAAAGGGAACGAGGACUCCUUUAAAUAGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003531666.3
ncRNA:22   UCAGAUAAAUUUCCUCAGGAGC   1
  |**|||||*||||||||||||*
targets:1715   ACACUAUUCAAAGGAGUCCUCC   1736

2.0 PREDICTED: Glycine max uncharacterized LOC100788011 (LOC100788011), transcript variant X2, mRNA uncharacterized LOC100788011(LOC100788011) coding protein psRNATarget
XM_006585565.2
ncRNA:22   UCAGAUAAAUUUCCUCAGGAGC   1
  |**|||||*||||||||||||*
targets:1823   ACACUAUUCAAAGGAGUCCUCC   1844

2.0 PREDICTED: Glycine max uncharacterized LOC100788011 (LOC100788011), transcript variant X1, mRNA uncharacterized LOC100788011(LOC100788011) coding protein psRNATarget