Search result

BaseInfo

ncRNA ID novel_gma_miR530
Species Glycine max
Class miRNA
Genome position Chr6:15815383-15815564 [-]
Reference genome Glycine_max_v2.0
Source SRR1451631;SRR1451634;SRR1451645;SRR1451650;SRR1451652;SRR1451653;SRR1451655;SRR1451658;SRR1451661;SRR1451662;SRR1451663;SRR1753104;SRR1753108;SRR2045228;SRR1295524;SRR1451604;SRR1451606;SRR1451608;SRR1292928;SRR1451610;SRR1451613;SRR1451615;SRR1451617;SRR1451621
Length 24
Mature sequence(if miRNA) 1 - UUUAGACGGAUGAUACUUUAGCCU - 24
Stem-loop(if miRNA) --    UU    A      C     A   GU    GAA         UAUUU   UAGUUAGUAUAAA               ---------U         UUU
  GUUA  GUAU UAUUUG CUGAA AUG  UACU   AAUAUUAUA     GUU             AAUAUUACGUGUAUA          AUAUAUAUA   A
  ||||  |||| |||||| ||||| |||  ||||   |||||||||     |||             |||||||||||||||          |||||||||   G
  CGAU  CAUA GUAGGC GAUUU UAU  AUGA   UUAUGAUGU     CGA             UUAUAGUGUAUAUAU          UAUAUAUGU   U
UC    UU    -      A     A   --    --A         --UUU   -------------               UUUAAAUUAU         UGU
Stem-loop sequence GUUAUUGUAUAUAUUUGCCUGAAAAUGGUUACUGAAAAUAUUAUAUAUUUGUUUAGUUAGUAUAAAAAUAUUACGUGUAUAUAUAUAUAUAUUUAGUUGUUGUAUAUAUUAUUAAAUUUUAUAUAUGUGAUAUUAGCUUUUGUAGUAUUAAGUAUAUAUUUAGACGGAUGAUACUUUAGCCU