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BaseInfo

ncRNA ID novel_gma_miR524
Species Glycine max
Class miRNA
Genome position Chr1:13068818-13068861 [+]
Reference genome Glycine_max_v2.0
Source SRR1451631
Length 21
Mature sequence(if miRNA) 24 - CAAAUUUUUCCUUUUCUUCGA - 44
Stem-loop(if miRNA) AA        A    UUCCAG
  GGGGAAGA GAAA      A
  |||||||| ||||
  CUUCUUUU CUUU      G
AG        C    UUAAAC
Stem-loop sequence AAGGGGAAGAAGAAAUUCCAGAGCAAAUUUUUCCUUUUCUUCGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003519697.3
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  |*||||||||||=||||||||
targets:1870   UGGAAGAAAAGGGAAAAUUUG   1890

1.5 PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100795451), transcript variant X2, mRNA histone-lysine N-methyltransferase EZA1-like(LOC100795451) coding protein psRNATarget
XM_014764208.1
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  |*||||||||||=||||||||
targets:1873   UGGAAGAAAAGGGAAAAUUUG   1893

1.5 PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100795451), transcript variant X1, mRNA histone-lysine N-methyltransferase EZA1-like(LOC100795451) coding protein psRNATarget
XM_006578101.2
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  *=|=||*||||||||||||||
targets:1449   AUGGAGCAAAGGAAAAAUUUG   1469

2.0 PREDICTED: Glycine max boron transporter 4-like (LOC100787412), transcript variant X3, mRNA boron transporter 4-like(LOC100787412) coding protein psRNATarget
XM_014774514.1
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  *=|=||*||||||||||||||
targets:1528   AUGGAGCAAAGGAAAAAUUUG   1548

2.0 PREDICTED: Glycine max boron transporter 4-like (LOC100787412), transcript variant X2, mRNA boron transporter 4-like(LOC100787412) coding protein psRNATarget
XM_014774513.1
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  *=|=||*||||||||||||||
targets:1612   AUGGAGCAAAGGAAAAAUUUG   1632

2.0 PREDICTED: Glycine max boron transporter 4-like (LOC100787412), transcript variant X1, mRNA boron transporter 4-like(LOC100787412) coding protein psRNATarget
XM_014770914.1
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  **|||||=|=|||||||||||
targets:2370   GAGAAGAGAGGGAAAAAUUUG   2390

2.5 PREDICTED: Glycine max regulatory-associated protein of TOR 1-like (LOC100779159), transcript variant X5, mRNA regulatory-associated protein of TOR 1-like(LOC100779159) coding protein psRNATarget
XM_006602631.2
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  **|||||=|=|||||||||||
targets:2613   GAGAAGAGAGGGAAAAAUUUG   2633

2.5 PREDICTED: Glycine max regulatory-associated protein of TOR 1-like (LOC100779159), transcript variant X4, mRNA regulatory-associated protein of TOR 1-like(LOC100779159) coding protein psRNATarget
XM_006602630.2
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  **|||||=|=|||||||||||
targets:2918   GAGAAGAGAGGGAAAAAUUUG   2938

2.5 PREDICTED: Glycine max regulatory-associated protein of TOR 1-like (LOC100779159), transcript variant X2, mRNA regulatory-associated protein of TOR 1-like(LOC100779159) coding protein psRNATarget
XM_003551547.3
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  **|||||=|=|||||||||||
targets:3047   GAGAAGAGAGGGAAAAAUUUG   3067

2.5 PREDICTED: Glycine max regulatory-associated protein of TOR 1-like (LOC100779159), transcript variant X1, mRNA regulatory-associated protein of TOR 1-like(LOC100779159) coding protein psRNATarget
XM_003533623.3
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  **|||||=|=|||||||||||
targets:3071   GAGAAGAGAGGGAAAAAUUUG   3091

2.5 PREDICTED: Glycine max regulatory-associated protein of TOR 1-like (LOC100777178), mRNA regulatory-associated protein of TOR 1-like(LOC100777178) coding protein psRNATarget
XM_014775420.1
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  **|||||||||||||=||||*
targets:1816   AGGAAGAAAAGGAAAGAUUUU   1836

2.5 PREDICTED: Glycine max dnaJ homolog subfamily C member 21-like (LOC100788305), transcript variant X3, mRNA dnaJ homolog subfamily C member 21-like(LOC100788305) coding protein psRNATarget
XM_006599310.2
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  |=|*||||||*||||||||||
targets:1764   UUGCAGAAAAAGAAAAAUUUG   1784

2.5 PREDICTED: Glycine max TMV resistance protein N-like (LOC100819910), mRNA TMV resistance protein N-like(LOC100819910) coding protein psRNATarget
XM_006588504.2
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  |*|||||*||||=||||||||
targets:1862   UGGAAGACAAGGGAAAAUUUG   1882

2.5 PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100808730), transcript variant X6, mRNA histone-lysine N-methyltransferase EZA1-like(LOC100808730) coding protein psRNATarget
XM_003535879.3
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  |*|||||*||||=||||||||
targets:1855   UGGAAGACAAGGGAAAAUUUG   1875

2.5 PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100808730), transcript variant X4, mRNA histone-lysine N-methyltransferase EZA1-like(LOC100808730) coding protein psRNATarget
XM_006588502.2
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  |*|||||*||||=||||||||
targets:1858   UGGAAGACAAGGGAAAAUUUG   1878

2.5 PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100808730), transcript variant X3, mRNA histone-lysine N-methyltransferase EZA1-like(LOC100808730) coding protein psRNATarget
XM_006588501.2
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  |*|||||*||||=||||||||
targets:1858   UGGAAGACAAGGGAAAAUUUG   1878

2.5 PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100808730), transcript variant X2, mRNA histone-lysine N-methyltransferase EZA1-like(LOC100808730) coding protein psRNATarget
XM_006588500.2
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  |*|||||*||||=||||||||
targets:1861   UGGAAGACAAGGGAAAAUUUG   1881

2.5 PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100808730), transcript variant X1, mRNA histone-lysine N-methyltransferase EZA1-like(LOC100808730) coding protein psRNATarget
XM_006588503.2
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  |*|||||*||||=||||||||
targets:1878   UGGAAGACAAGGGAAAAUUUG   1898

2.5 PREDICTED: Glycine max histone-lysine N-methyltransferase EZA1-like (LOC100808730), transcript variant X5, mRNA histone-lysine N-methyltransferase EZA1-like(LOC100808730) coding protein psRNATarget
XM_003548835.3
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  |=|*||||||*||||||||||
targets:3221   UUGUAGAAAAAGAAAAAUUUG   3241

2.5 PREDICTED: Glycine max TMV resistance protein N-like (LOC100798421), mRNA TMV resistance protein N-like(LOC100798421) coding protein psRNATarget
XM_014778464.1
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  **||||=||||||||||*|||
targets:35   CAGAAGGAAAGGAAAAACUUG   55

2.5 PREDICTED: Glycine max uncharacterized LOC106799570 (LOC106799570), mRNA uncharacterized LOC106799570(LOC106799570) coding protein psRNATarget
XM_014765621.1
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  *=|||||||||||||||*||*
targets:1400   AUGAAGAAAAGGAAAAAAUUA   1420

2.5 PREDICTED: Glycine max apoptosis inhibitor 5-like (LOC100803493), transcript variant X2, mRNA apoptosis inhibitor 5-like(LOC100803493) coding protein psRNATarget
XM_003542660.3
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  *=|||||||||||||||*||*
targets:1470   AUGAAGAAAAGGAAAAAAUUA   1490

2.5 PREDICTED: Glycine max apoptosis inhibitor 5-like (LOC100803493), transcript variant X1, mRNA apoptosis inhibitor 5-like(LOC100803493) coding protein psRNATarget
AK286851.1
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  *=|||||||||||||||*||*
targets:1448   AUGAAGAAAAGGAAAAAAUUA   1468

2.5 Glycine max cDNA, clone: GMFL01-38-I17 NA coding protein psRNATarget
XM_003529311.3
ncRNA:21   AGCUUCUUUUCCUUUUUAAAC   1
  *=|||||||||||||||*||*
targets:1483   AUGAAGAAAAGGAAAAAAUUA   1503

2.5 PREDICTED: Glycine max apoptosis inhibitor 5 (LOC100800145), mRNA apoptosis inhibitor 5(LOC100800145) coding protein psRNATarget
XM_014773896.1
ncRNA:21   AGCUUCUUUU-CCUUUUUAAAC   1
  *=||||||||-|||||||||||
targets:674   GUGAAGAAAAUGGAAAAAUUUG   695

3.0 PREDICTED: Glycine max uncharacterized LOC100809482 (LOC100809482), transcript variant X8, mRNA uncharacterized LOC100809482(LOC100809482) coding protein psRNATarget
XM_014773897.1
ncRNA:21   AGCUUCUUUU-CCUUUUUAAAC   1
  *=||||||||-|||||||||||
targets:687   GUGAAGAAAAUGGAAAAAUUUG   708

3.0 PREDICTED: Glycine max uncharacterized LOC100809482 (LOC100809482), transcript variant X9, mRNA uncharacterized LOC100809482(LOC100809482) coding protein psRNATarget
XM_014773893.1
ncRNA:21   AGCUUCUUUU-CCUUUUUAAAC   1
  *=||||||||-|||||||||||
targets:706   GUGAAGAAAAUGGAAAAAUUUG   727

3.0 PREDICTED: Glycine max uncharacterized LOC100809482 (LOC100809482), transcript variant X3, mRNA uncharacterized LOC100809482(LOC100809482) coding protein psRNATarget
XM_014773895.1
ncRNA:21   AGCUUCUUUU-CCUUUUUAAAC   1
  *=||||||||-|||||||||||
targets:782   GUGAAGAAAAUGGAAAAAUUUG   803

3.0 PREDICTED: Glycine max uncharacterized LOC100809482 (LOC100809482), transcript variant X7, mRNA uncharacterized LOC100809482(LOC100809482) coding protein psRNATarget
XM_003521387.3
ncRNA:21   AGCUUCUUUU-CCUUUUUAAAC   1
  *=||||||||-|||||||||||
targets:798   GUGAAGAAAAUGGAAAAAUUUG   819

3.0 PREDICTED: Glycine max uncharacterized LOC100809482 (LOC100809482), transcript variant X5, mRNA uncharacterized LOC100809482(LOC100809482) coding protein psRNATarget
XM_006576984.2
ncRNA:21   AGCUUCUUUU-CCUUUUUAAAC   1
  *=||||||||-|||||||||||
targets:817   GUGAAGAAAAUGGAAAAAUUUG   838

3.0 PREDICTED: Glycine max uncharacterized LOC100809482 (LOC100809482), transcript variant X1, mRNA uncharacterized LOC100809482(LOC100809482) coding protein psRNATarget
XM_006576985.2
ncRNA:21   AGCUUCUUUU-CCUUUUUAAAC   1
  *=||||||||-|||||||||||
targets:836   GUGAAGAAAAUGGAAAAAUUUG   857

3.0 PREDICTED: Glycine max uncharacterized LOC100809482 (LOC100809482), transcript variant X2, mRNA uncharacterized LOC100809482(LOC100809482) coding protein psRNATarget
XM_003553531.3
ncRNA:21   AGCUUCUUUU-CCUUUUUAAAC   1
  *=||||||||-|||||||||||
targets:783   GUGAAGAAAAUGGAAAAAUUUG   804

3.0 PREDICTED: Glycine max uncharacterized LOC100808409 (LOC100808409), mRNA uncharacterized LOC100808409(LOC100808409) coding protein psRNATarget
XM_014773894.1
ncRNA:21   AGCUUCUUUU-CCUUUUUAAAC   1
  *=||||||||-|||||||||||
targets:861   GUGAAGAAAAUGGAAAAAUUUG   882

3.0 PREDICTED: Glycine max uncharacterized LOC100809482 (LOC100809482), transcript variant X6, mRNA uncharacterized LOC100809482(LOC100809482) coding protein psRNATarget
XM_006576986.2
ncRNA:21   AGCUUCUUUU-CCUUUUUAAAC   1
  *=||||||||-|||||||||||
targets:893   GUGAAGAAAAUGGAAAAAUUUG   914

3.0 PREDICTED: Glycine max uncharacterized LOC100809482 (LOC100809482), transcript variant X4, mRNA uncharacterized LOC100809482(LOC100809482) coding protein psRNATarget
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