Search result

BaseInfo

ncRNA ID novel_gma_miR522
Species Glycine max
Class miRNA
Genome position Chr4:18902769-18902921 [+]
Reference genome Glycine_max_v2.0
Source SRR1294478
Length 21
Mature sequence(if miRNA) 1 - UCUCUCUGAAAUCUUCGACCU - 21
Stem-loop(if miRNA) --                                 A           A   UC  C     UU     CU     GC
  UCUCUCUGAAAUCUUCGACCUCGUCAACGAUGA GAUUUAAAGUC UCU  GU GAGAA  CCUUG  UUGUU  U
  ||||||||||||||||||||||||||||||||| ||||||||||| |||  || |||||  |||||  |||||  U
  AGAGAGACUUUAGAAGCUGGAGUAGUUGCUACU CUAAAUUUCAG AGA  UA UUCUU  GGAGC  GGCGA  U
AC                                 G           A   -C  C     CU     -U     AG
Stem-loop sequence UCUCUCUGAAAUCUUCGACCUCGUCAACGAUGAAGAUUUAAAGUCAUCUUCGUCGAGAAUUCCUUGCUUUGUUGCUUUGAAGCGGUCGAGGUCUUCUUCAUCAGAAGACUUUAAAUCGUCAUCGUUGAUGAGGUCGAAGAUUUCAGAGAGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003523708.3
ncRNA:21   UCCAGCUUCUAAAGUCUCUCU   1
  |*|||*|*|||||||||||||
targets:569   AUGUCUACGAUUUCAGAGAGA   589

2.0 PREDICTED: Glycine max uncharacterized LOC100782614 (LOC100782614), mRNA uncharacterized LOC100782614(LOC100782614) coding protein psRNATarget