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BaseInfo

ncRNA ID novel_gma_miR521
Species Glycine max
Class miRNA
Genome position Chr4:5047201-5047283 [-]
Reference genome Glycine_max_v2.0
Source SRR1451631;SRR1451632;SRR1451633;SRR1451634;SRR1451636;SRR1451637;SRR1451639;SRR1451645;SRR1451650;SRR1451655;SRR1295516;SRR835758;SRR835759;SRR835762;SRR835765;SRR1451612;SRR1451614;SRR1451616;SRR1451618;SRR1451621;SRR1451623;SRR1451626;SRR1451627
Length 23
Mature sequence(if miRNA) 1 - UGCUCACUUCUCUUUCUGUCAAC - 23
Stem-loop(if miRNA) --        -    -        A        CU       G
  UGACAGAA GAGA GUGAGCAC CAGAAGCA  UGGUAUA U
  |||||||| |||| |||||||| ||||||||  |||||||
  ACUGUCUU CUCU CACUCGUG GUUUUCGU  GUCAUAU U
CA        U    U        C        -U       A
Stem-loop sequence UGACAGAAGAGAGUGAGCACACAGAAGCACUUGGUAUAGUUAUAUACUGUUGCUUUUGCGUGCUCACUUCUCUUUCUGUCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI410467.1
ncRNA:23   CAACUGUCUUUCUCUUCACUCGU   1
  ***|||||||||||*||||||||
targets:7   ACCGACAGAAAGAGUAGUGAGCA   29

1.5 Sequence 8592 from Patent EP2074227 NA coding protein psRNATarget
JB170928.1
ncRNA:23   CAACUGUCUUUCUCUUCACUCGU   1
  ***|||||||||||*||||||||
targets:7   ACCGACAGAAAGAGUAGUGAGCA   29

1.5 Sequence 8592 from Patent EP2559767 NA coding protein psRNATarget
LQ242597.1
ncRNA:23   CAACUGUCUUUCUCUUCACUCGU   1
  ***|||||||||||*||||||||
targets:7   ACCGACAGAAAGAGUAGUGAGCA   29

1.5 Sequence 8592 from Patent EP2985353 NA coding protein psRNATarget
XM_014768596.1
ncRNA:23   CAACUGUCUUUCUCUUCACUCGU   1
  ***|||||=|||||*||||||||
targets:852   AAAGACAGGAAGAGCAGUGAGCA   874

2.5 PREDICTED: Glycine max metallophosphoesterase 1-like (LOC102667430), mRNA metallophosphoesterase 1-like(LOC102667430) coding protein psRNATarget