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BaseInfo

ncRNA ID novel_gma_miR512
Species Glycine max
Class miRNA
Genome position Chr3:6634777-6634845 [+]
Reference genome Glycine_max_v2.0
Source SRR1294478
Length 24
Mature sequence(if miRNA) 46 - AAUAUCAACACUCUAACAUGCGGU - 69
Stem-loop(if miRNA) -- A  CA               C        GA
  C CA  UUAGAGUGUUGAUAU GUAGCGAC  G
  | ||  ||||||||||||||| ||||||||  G
  G GU  AAUCUCACAACUAUA CAUUGCUG  C
UG C  AC               A        AG
Stem-loop sequence CACACAUUAGAGUGUUGAUAUCGUAGCGACGAGGCGAGUCGUUACAAUAUCAACACUCUAACAUGCGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014774757.1
ncRNA:24   UGGCGUACAAUCUCACAACUAUAA   1
  ***|*=|||||||||*||||||||
targets:460   CAAGGGUGUUAGAGUUUUGAUAUU   483

2.5 PREDICTED: Glycine max uncharacterized LOC106798428 (LOC106798428), mRNA uncharacterized LOC106798428(LOC106798428) coding protein psRNATarget
XM_006601172.2
ncRNA:24   UGGCGUACAA-UCUCACAACUAUAA   1
  |***=*||||-||||||||||||||
targets:301   AAAUUCUGUUCAGAGUGUUGAUAUU   325

3.0 PREDICTED: Glycine max uncharacterized LOC100778066 (LOC100778066), transcript variant X3, mRNA uncharacterized LOC100778066(LOC100778066) coding protein psRNATarget
XM_003550223.3
ncRNA:24   UGGCGUACAA-UCUCACAACUAUAA   1
  |***=*||||-||||||||||||||
targets:311   AAAUUCUGUUCAGAGUGUUGAUAUU   335

3.0 PREDICTED: Glycine max uncharacterized LOC100778066 (LOC100778066), transcript variant X4, mRNA uncharacterized LOC100778066(LOC100778066) coding protein psRNATarget
XM_006601171.2
ncRNA:24   UGGCGUACAA-UCUCACAACUAUAA   1
  |***=*||||-||||||||||||||
targets:461   AAAUUCUGUUCAGAGUGUUGAUAUU   485

3.0 PREDICTED: Glycine max uncharacterized LOC100778066 (LOC100778066), transcript variant X2, mRNA uncharacterized LOC100778066(LOC100778066) coding protein psRNATarget
XM_006601170.2
ncRNA:24   UGGCGUACAA-UCUCACAACUAUAA   1
  |***=*||||-||||||||||||||
targets:485   AAAUUCUGUUCAGAGUGUUGAUAUU   509

3.0 PREDICTED: Glycine max uncharacterized LOC100778066 (LOC100778066), transcript variant X1, mRNA uncharacterized LOC100778066(LOC100778066) coding protein psRNATarget