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BaseInfo

ncRNA ID	novel_gma_miR511
Species	Glycine max
Class	miRNA
Genome position	Chr2:6002285-6002342 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451631;SRR1451633;SRR1451635;SRR1451636;SRR1451637;SRR1451641;SRR1451643;SRR1451645;SRR1451646;SRR1451648;SRR1451649;SRR1295525;SRR1295526;SRR1295527;SRR1295531;SRR1451605;SRR1451609;SRR1451615;SRR1451616;SRR1451621;SRR1451627
Length	25
Mature sequence(if miRNA)	1 - CUCGCAGAACCAAAGAAAACUCACU - 25
Stem-loop(if miRNA)	--CA         -GU          CUU     GGUUUUCUU   UUCUGCGAGG   A     |||||||||   ||||||||||   A     UCAAAAGAA   AAGACGCUCC   G UCAC         ACC          AAA
Stem-loop sequence	CAGGUUUUCUUGUUUCUGCGAGGCUUAAGAAACCUCGCAGAACCAAAGAAAACUCACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT096804.1	ncRNA:25   UCACUCAAAAGAAACCAAGACGCUC   1   *|****||||*|||||||||||||| targets:329   UGCAUAUUUUAUUUGGUUCUGCGAG   353 Target Full Sequence	1.0	Soybean clone JCVI-FLGm-25F10 unknown mRNA	NA	coding protein	psRNATarget
AB007503.1	ncRNA:25   UCACUCAAAAGAAACCAAGACGCUC   1   *|****||||*|||||||||||||| targets:310   UGCAUAUUUUAUUUGGUUCUGCGAG   334 Target Full Sequence	1.0	Glycine max mRNA for squalene synthase, complete cds	NA	coding protein	psRNATarget
AK245602.1	ncRNA:25   UCACUCAAAAGAAACCAAGACGCUC   1   *|****||||*|||||||||||||| targets:331   UGCAUAUUUUAUUUGGUUCUGCGAG   355 Target Full Sequence	1.0	Glycine max cDNA, clone: GMFL01-35-C18	NA	coding protein	psRNATarget
AK243811.1	ncRNA:25   UCACUCAAAAGAAACCAAGACGCUC   1   *|****||||*|||||||||||||| targets:424   UGCAUAUUUUAUUUGGUUCUGCGAG   448 Target Full Sequence	1.0	Glycine max cDNA, clone: GMFL01-01-F04	NA	coding protein	psRNATarget
NM_001352036.1	ncRNA:25   UCACUCAAAAGAAACCAAGACGCUC   1   *|****||||*|||||||||||||| targets:452   UGCAUAUUUUAUUUGGUUCUGCGAG   476 Target Full Sequence	1.0	Glycine max squalene synthase (LOC547940), transcript variant 2, mRNA	NA	coding protein	psRNATarget
NM_001249436.2	ncRNA:25   UCACUCAAAAGAAACCAAGACGCUC   1   *|****||||*|||||||||||||| targets:452   UGCAUAUUUUAUUUGGUUCUGCGAG   476 Target Full Sequence	1.0	Glycine max squalene synthase (LOC547940), transcript variant 1, mRNA	squalene synthase(LOC547940)	coding protein	psRNATarget
XM_003537794.3	ncRNA:25   UCACUCAAAAGAAACCAAGACGCUC   1   *|****||||*|||||||||||||| targets:463   UGCAUAUUUUAUUUGGUUCUGCGAG   487 Target Full Sequence	1.0	PREDICTED: Glycine max squalene synthase (LOC100775983), transcript variant X1, mRNA	squalene synthase(LOC100775983)	coding protein	psRNATarget
XM_006590808.2	ncRNA:25   UCACUCAAAAGAAACCAAGACGCUC   1   *|****||||*|||||||||||||| targets:463   UGCAUAUUUUAUUUGGUUCUGCGAG   487 Target Full Sequence	1.0	PREDICTED: Glycine max squalene synthase (LOC100775983), transcript variant X2, mRNA	squalene synthase(LOC100775983)	coding protein	psRNATarget