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BaseInfo

ncRNA ID novel_gma_miR508
Species Glycine max
Class miRNA
Genome position Chr2:38792965-38793049 [+]
Reference genome Glycine_max_v2.0
Source SRR1451631;SRR1451632;SRR1451633;SRR1451636;SRR1451637;SRR1451639;SRR1451645;SRR1451647;SRR1451649;SRR1451650;SRR1451655;SRR1451657;SRR1451662;SRR1451664;SRR835759;SRR835762;SRR835767;SRR835768;SRR835770;SRR835771;SRR835772;SRR1295520;SRR1451613;SRR1451614;SRR1451616;SRR1451618;SRR1451621;SRR1451625;SRR1451626
Length 23
Mature sequence(if miRNA) 63 - UGCUCACUUCUCUAUCUGUCAGC - 85
Stem-loop(if miRNA) --       -     -        A    A  GGA         A
  UGACAGA AGAGA GUGAGCAC UACU GU   GAUUGUAUG G
  ||||||| ||||| |||||||| |||| ||   |||||||||
  ACUGUCU UCUCU CACUCGUG GUGG CG   UUAACAUAC G
CG       A     U        C    G  ---         G
Stem-loop sequence UGACAGAAGAGAGUGAGCACAUACUAGUGGAGAUUGUAUGAGGGCAUACAAUUGCGGGUGCGUGCUCACUUCUCUAUCUGUCAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ242597.1
ncRNA:23   CGACUGUCUAUCUCUUCACUCGU   1
  *|*||||||*||||*||||||||
targets:7   ACCGACAGAAAGAGUAGUGAGCA   29

2.5 Sequence 8592 from Patent EP2985353 NA coding protein psRNATarget
HI410467.1
ncRNA:23   CGACUGUCUAUCUCUUCACUCGU   1
  *|*||||||*||||*||||||||
targets:7   ACCGACAGAAAGAGUAGUGAGCA   29

2.5 Sequence 8592 from Patent EP2074227 NA coding protein psRNATarget
JB170928.1
ncRNA:23   CGACUGUCUAUCUCUUCACUCGU   1
  *|*||||||*||||*||||||||
targets:7   ACCGACAGAAAGAGUAGUGAGCA   29

2.5 Sequence 8592 from Patent EP2559767 NA coding protein psRNATarget