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BaseInfo

ncRNA ID novel_gma_miR480
Species Glycine max
Class miRNA
Genome position Chr16:6961632-6961736 [-]
Reference genome Glycine_max_v2.0
Source SRR1451631
Length 24
Mature sequence(if miRNA) 82 - CUGUUUCCUGUUUUCAUUUUCACU - 105
Stem-loop(if miRNA) --C     C                      UGUUUU      UCCAACCAAACA
   UGUUU CUGUUUUCAUUUUCACUGAAAA      CAGAAA            C
   ||||| ||||||||||||||||||||||      ||||||            A
   AUAAA GACAAAAGUAAAAGUGGCUUUU      GUCUUU            U
CCA     A                      ------      UGCCACUACUUU
Stem-loop sequence CUGUUUCCUGUUUUCAUUUUCACUGAAAAUGUUUUCAGAAAUCCAACCAAACACAUUUUCAUCACCGUUUUCUGUUUUCGGUGAAAAUGAAAACAGAAAAUAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773757.1
ncRNA:24   UCACUUUUACUUUUGUCCUUUGUC   1
  |||||||||*|||||||||||||*
targets:2502   AGUGAAAAUAAAAACAGGAAACAA   2525

2.0 PREDICTED: Glycine max transcription factor bHLH27-like (LOC102668755), transcript variant X7, mRNA transcription factor bHLH27-like(LOC102668755) coding protein psRNATarget