ncRNA ID | novel_gma_miR480 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:6961632-6961736 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451631 |
Length | 24 |
Mature sequence(if miRNA) | 82 - CUGUUUCCUGUUUUCAUUUUCACU - 105 |
Stem-loop(if miRNA) |
--C     C                      UGUUUU      UCCAACCAAACA    UGUUU CUGUUUUCAUUUUCACUGAAAA      CAGAAA            C    ||||| ||||||||||||||||||||||      ||||||            A    AUAAA GACAAAAGUAAAAGUGGCUUUU      GUCUUU            U CCA     A                      ------      UGCCACUACUUU |
Stem-loop sequence | CUGUUUCCUGUUUUCAUUUUCACUGAAAAUGUUUUCAGAAAUCCAACCAAACACAUUUUCAUCACCGUUUUCUGUUUUCGGUGAAAAUGAAAACAGAAAAUAACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014773757.1 |
|
2.0 | PREDICTED: Glycine max transcription factor bHLH27-like (LOC102668755), transcript variant X7, mRNA | transcription factor bHLH27-like(LOC102668755) | coding protein | psRNATarget |