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BaseInfo

ncRNA ID	novel_gma_miR478
Species	Glycine max
Class	miRNA
Genome position	Chr16:11434499-11434590 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451631;SRR1451633;SRR1451634;SRR1451640;SRR1451641;SRR1451645;SRR1451647;SRR1451649
Length	21
Mature sequence(if miRNA)	72 - UACCCUUCUAAGAUGAUUUUU - 92
Stem-loop(if miRNA)	--               A  U   AC     U  G        A A   UACCCUUCUAAGAUG UU UUA  UAAGA CC UCUUAGAA G U   ||||||||||||||| || |||  ||||| || |||||||| |   AUGGGAAGAUUCUAU AA AAU  AUUUU GG AGAAUCUU C A CC               C  C   CC     U  A        A U
Stem-loop sequence	UACCCUUCUAAGAUGAUUUUUAACUAAGAUCCGUCUUAGAAAGAUAUCAUUCUAAGAAGGUUUUUACCUAACAACUAUCUUAGAAGGGUACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014771087.1	ncRNA:21   UUUUUAGUAGAAUCUUCCCAU   1   ||||||||||||||||||||| targets:2651   AAAAAUCAUCUUAGAAGGGUA   2671 Target Full Sequence	0.0	PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA	uncharacterized LOC102664939(LOC102664939)	coding protein	psRNATarget
XM_006587844.2	ncRNA:21   UUUUUAGUAGAAUCUUCCCAU   1   ***|||||||||*|||||||| targets:774   CUCAAUCAUCUUUGAAGGGUA   794 Target Full Sequence	2.5	PREDICTED: Glycine max BTB/POZ domain-containing protein At3g08570-like (LOC100801644), transcript variant X4, mRNA	BTB/POZ domain-containing protein At3g08570-like(LOC100801644)	coding protein	psRNATarget
XM_006587843.2	ncRNA:21   UUUUUAGUAGAAUCUUCCCAU   1   ***|||||||||*|||||||| targets:823   CUCAAUCAUCUUUGAAGGGUA   843 Target Full Sequence	2.5	PREDICTED: Glycine max BTB/POZ domain-containing protein At3g08570-like (LOC100801644), transcript variant X3, mRNA	BTB/POZ domain-containing protein At3g08570-like(LOC100801644)	coding protein	psRNATarget
XM_006587841.2	ncRNA:21   UUUUUAGUAGAAUCUUCCCAU   1   ***|||||||||*|||||||| targets:1292   CUCAAUCAUCUUUGAAGGGUA   1312 Target Full Sequence	2.5	PREDICTED: Glycine max BTB/POZ domain-containing protein At3g08570-like (LOC100801644), transcript variant X2, mRNA	BTB/POZ domain-containing protein At3g08570-like(LOC100801644)	coding protein	psRNATarget
XM_006587840.2	ncRNA:21   UUUUUAGUAGAAUCUUCCCAU   1   ***|||||||||*|||||||| targets:1290   CUCAAUCAUCUUUGAAGGGUA   1310 Target Full Sequence	2.5	PREDICTED: Glycine max BTB/POZ domain-containing protein At3g08570-like (LOC100801644), transcript variant X1, mRNA	BTB/POZ domain-containing protein At3g08570-like(LOC100801644)	coding protein	psRNATarget