ncRNA ID | novel_gma_miR462 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:12591108-12591211 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451631 |
Length | 24 |
Mature sequence(if miRNA) | 81 - UAACCGUCUUUGAAUGUAGUGUCU - 104 |
Stem-loop(if miRNA) |
--    C     U        UG  U   U GA                  A   UAAC GUCUU GAAUGUAG  UC GAU C  CAUUCAAAGACGGUUAUU C   |||| ||||| ||||||||  || ||| |  ||||||||||||||||||   AUUG CAGAA UUUACAUC  GG CUG G  GUAAGUUUCUGCCAAUAA A UU    A     C        UU  U   U AC                  U |
Stem-loop sequence | UAACCGUCUUUGAAUGUAGUGUCUGAUUCGACAUUCAAAGACGGUUAUUACAUAAUAACCGUCUUUGAAUGCAGUGUCUGGUUCUACAUUUCAAGACAGUUAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014775607.1 |
|
1.0 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget | |||||||||
XM_014775607.1 |
|
2.0 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget | |||||||||
XM_003534913.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100781107 (LOC100781107), mRNA | uncharacterized LOC100781107(LOC100781107) | coding protein | psRNATarget |