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BaseInfo

ncRNA ID novel_gma_miR460
Species Glycine max
Class miRNA
Genome position Chr14:23094439-23094600 [-]
Reference genome Glycine_max_v2.0
Source SRR1451631
Length 21
Mature sequence(if miRNA) 1 - AUAAAAAAUCGAUGUUAACGU - 21
Stem-loop(if miRNA) --A              C                    C   U               A   -A    CU        -  U
   UUAACAUCGGUUUU UAUAAAAACCGAUGUUAACU AUA AUUAACAUCGGUUUU UAU  AAAA  GAUGUUAA GU A
   |||||||||||||| |||||||||||||||||||| ||| ||||||||||||||| |||  ||||  |||||||| || G
   AAUUGUAGCUAAAA AUAUUUUUGGCUACAAUUGA UAU UAAUUGUAGUCAAAA AUA  UUUU  UUACAAUU CA A
UGC              A                    A   C               -   CG    AU        A  A
Stem-loop sequence AUUAACAUCGGUUUUCUAUAAAAACCGAUGUUAACUCAUAUAUUAACAUCGGUUUUAUAUAAAAACUGAUGUUAAGUUAGAAACAUUAACAUUUAUUUUGCAUAAAAACUGAUGUUAAUCUAUAAGUUAACAUCGGUUUUUAUAAAAAAUCGAUGUUAACGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003549285.3
ncRNA:21   UGCAAUUGUAGCUAAAAAAUA   1
  |*|||||||||||||||*||*
targets:2146   AAGUUAACAUCGAUUUUAUAA   2166

2.5 PREDICTED: Glycine max L-type lectin-domain containing receptor kinase IX.1-like (LOC100796302), mRNA L-type lectin-domain containing receptor kinase IX.1-like(LOC100796302) coding protein psRNATarget