ncRNA ID | bra-miR9562-5p |
Species | Brassica rapa |
Class | miRNA |
Genome position | chrA2:18896191-18896339 [+] |
Reference genome | Brapa_1.1 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 43 - ACUAUGCAAUUGUGAACAAAC - 63 |
Stem-loop(if miRNA) |
---   --  CUUAAAACAUUUCCAAUUCCACUGUAAAAUGGAGUGGACUAUGCAAUUGUGAACAAACAAAAAAUU    AGU  GU                                                                  C    |||  ||    GUU  AG                                                                  A GAC   UU  AUGACGUUUUAUCUCACUUAAUACGUCAACACUUAUUUGUAUUUUUGUAAUGACGUAUAUAUCAUU |
Stem-loop sequence | AGUGUCUUAAAACAUUUCCAAUUCCACUGUAAAAUGGAGUGGACUAUGCAAUUGUGAACAAACAAAAAAUUCAUUACUAUAUAUGCAGUAAUGUUUUUAUGUUUAUUCACAACUGCAUAAUUCACUCUAUUUUGCAGUAGAUUUUGCAG |
1 | PMID:24559317
"Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis"; Jiang J, Lv M, Liang Y, Ma Z, Cao J; BMC Genomics. 15:146(2014). |