Search result

BaseInfo

ncRNA ID novel_gma_miR448
Species Glycine max
Class miRNA
Genome position Chr10:28535372-28535452 [+]
Reference genome Glycine_max_v2.0
Source SRR1451631
Length 25
Mature sequence(if miRNA) 1 - UAUUAACAUCGGUUCUCUAGAAGAA - 25
Stem-loop(if miRNA) --              -CUC       A            A
  UAUUAACAUCGGUU    UAGAAGA CCAAUGUUAAUG A
  ||||||||||||||    ||||||| |||||||||||| A
  AUAAUUGUAGCCAA    AUCUUUU GGUUACAAUUAU U
AU              AAUC       -            A
Stem-loop sequence UAUUAACAUCGGUUCUCUAGAAGAACCAAUGUUAAUGAAAUAUAUUAACAUUGGUUUUCUACUAAAACCGAUGUUAAUAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003534035.3
ncRNA:25   AAGAAGAUCUCUUGGCUACAAUUAU   1
  |||||-||*||*||||||||||||*
targets:818   UUCUU-UAUAGCACCGAUGUUAAUU   841

3.0 PREDICTED: Glycine max miraculin-like (LOC100779841), mRNA miraculin-like(LOC100779841) coding protein psRNATarget