ncRNA ID | novel_gma_miR440 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:12103217-12103298 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451630;SRR1451632;SRR1451634;SRR1451635;SRR1451641;SRR1451645;SRR1451646;SRR1451654;SRR1451661;SRR1451664;SRR1753104;SRR1753108;SRR1451605;SRR1451607;SRR1451611;SRR1451615;SRR1451626 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCUCAAUAGCUCUUCUAGCUU - 21 |
Stem-loop(if miRNA) |
--            U       A     U        UAUA   GCUAGAAGAGCU UUGGGAG UUUUC ACUGGAAA    G   |||||||||||| ||||||| ||||| ||||||||   CGAUCUUCUCGA AACUCUC AAGAG UGACCUUU    A UU            U       A     U        UUCG |
Stem-loop sequence | GCUAGAAGAGCUUUUGGGAGAUUUUCUACUGGAAAUAUAGAGCUUUUUCCAGUUGAGAAACUCUCAAUAGCUCUUCUAGCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006580435.2 |
|
2.0 | PREDICTED: Glycine max U-box domain-containing protein 35-like (LOC100803837), mRNA | U-box domain-containing protein 35-like(LOC100803837) | coding protein | psRNATarget |