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BaseInfo

ncRNA ID novel_gma_miR440
Species Glycine max
Class miRNA
Genome position Chr9:12103217-12103298 [-]
Reference genome Glycine_max_v2.0
Source SRR1451630;SRR1451632;SRR1451634;SRR1451635;SRR1451641;SRR1451645;SRR1451646;SRR1451654;SRR1451661;SRR1451664;SRR1753104;SRR1753108;SRR1451605;SRR1451607;SRR1451611;SRR1451615;SRR1451626
Length 21
Mature sequence(if miRNA) 1 - UCUCAAUAGCUCUUCUAGCUU - 21
Stem-loop(if miRNA) --            U       A     U        UAUA
  GCUAGAAGAGCU UUGGGAG UUUUC ACUGGAAA    G
  |||||||||||| ||||||| ||||| ||||||||
  CGAUCUUCUCGA AACUCUC AAGAG UGACCUUU    A
UU            U       A     U        UUCG
Stem-loop sequence GCUAGAAGAGCUUUUGGGAGAUUUUCUACUGGAAAUAUAGAGCUUUUUCCAGUUGAGAAACUCUCAAUAGCUCUUCUAGCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006580435.2
ncRNA:21   UUCGAUCUUCUCGAUAACUCU   1
  |*|=|=|||||||||||||||
targets:2250   AUGUUGGAAGAGCUAUUGAGA   2270

2.0 PREDICTED: Glycine max U-box domain-containing protein 35-like (LOC100803837), mRNA U-box domain-containing protein 35-like(LOC100803837) coding protein psRNATarget