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BaseInfo

ncRNA ID novel_gma_miR438
Species Glycine max
Class miRNA
Genome position Chr1:17483684-17483769 [+]
Reference genome Glycine_max_v2.0
Source SRR1451630;SRR1451633;SRR1451636;SRR1451640;SRR1451641;SRR1451642;SRR1451646;SRR1451616;SRR1451619;SRR1451621
Length 23
Mature sequence(if miRNA) 64 - AAAAUAGUCAUUUCGAAACAGGC - 86
Stem-loop(if miRNA) --  -                       A G       UG   C
  CU UUUUGAAAUGGCUAUUUUUGCUU U GAAAAGG  UUU A
  || ||||||||||||||||||||||| | |||||||  |||
  GA AAAGCUUUACUGAUAAAAACGAA A UUUUUCC  AAA G
CG  C                       - G       CU   A
Stem-loop sequence CUUUUUGAAAUGGCUAUUUUUGCUUAUGGAAAAGGUGUUUCAGAAAAUCCCUUUUUGAAAGCAAAAAUAGUCAUUUCGAAACAGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766975.1
ncRNA:23   CGGACAAAGCUUUACUGAUAAAA   1
  ***||||||*||||*||||||||
targets:715   UAAUGUUUCAAAAUUACUAUUUU   737

2.5 PREDICTED: Glycine max putative exosome complex exonuclease RRP42 (LOC100801931), mRNA putative exosome complex exonuclease RRP42(LOC100801931) coding protein psRNATarget