ncRNA ID | novel_gma_miR438 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:17483684-17483769 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451630;SRR1451633;SRR1451636;SRR1451640;SRR1451641;SRR1451642;SRR1451646;SRR1451616;SRR1451619;SRR1451621 |
Length | 23 |
Mature sequence(if miRNA) | 64 - AAAAUAGUCAUUUCGAAACAGGC - 86 |
Stem-loop(if miRNA) |
--  -                       A G       UG   C   CU UUUUGAAAUGGCUAUUUUUGCUU U GAAAAGG  UUU A   || ||||||||||||||||||||||| | |||||||  |||   GA AAAGCUUUACUGAUAAAAACGAA A UUUUUCC  AAA G CG  C                       - G       CU   A |
Stem-loop sequence | CUUUUUGAAAUGGCUAUUUUUGCUUAUGGAAAAGGUGUUUCAGAAAAUCCCUUUUUGAAAGCAAAAAUAGUCAUUUCGAAACAGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014766975.1 |
|
2.5 | PREDICTED: Glycine max putative exosome complex exonuclease RRP42 (LOC100801931), mRNA | putative exosome complex exonuclease RRP42(LOC100801931) | coding protein | psRNATarget |