ncRNA ID | novel_gma_miR436 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:12750310-12750395 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294478;SRR1294479;SRR1294482;SRR2045230;SRR2045232;SRR1294487;SRR2045371;SRR2045372;SRR1292925;SRR1295522;SRR1292928;SRR1294474;SRR1294475 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAACUGCAGAAUCUCAAUUUAAAU - 24 |
Stem-loop(if miRNA) |
--           A                        A AUC   UUAAAUUGAGA UUUGUAGUUUUUUAUAAAUUGAGG G   U   ||||||||||| |||||||||||||||||||||||| |   AAUUUAACUCU AGACGUCAAAAAAUAUUUAAUUCC C   A UA           A                        C CAC |
Stem-loop sequence | UUAAAUUGAGAAUUUGUAGUUUUUUAUAAAUUGAGGAGAUCUACACCCCCUUAAUUUAUAAAAAACUGCAGAAUCUCAAUUUAAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006591192.2 |
|
2.5 | PREDICTED: Glycine max cysteine-rich repeat secretory protein 15-like (LOC100806098), transcript variant X1, mRNA | cysteine-rich repeat secretory protein 15-like(LOC100806098) | coding protein | psRNATarget |