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BaseInfo

ncRNA ID novel_gma_miR436
Species Glycine max
Class miRNA
Genome position Chr2:12750310-12750395 [-]
Reference genome Glycine_max_v2.0
Source SRR1294478;SRR1294479;SRR1294482;SRR2045230;SRR2045232;SRR1294487;SRR2045371;SRR2045372;SRR1292925;SRR1295522;SRR1292928;SRR1294474;SRR1294475
Length 24
Mature sequence(if miRNA) 1 - AAACUGCAGAAUCUCAAUUUAAAU - 24
Stem-loop(if miRNA) --           A                        A AUC
  UUAAAUUGAGA UUUGUAGUUUUUUAUAAAUUGAGG G   U
  ||||||||||| |||||||||||||||||||||||| |
  AAUUUAACUCU AGACGUCAAAAAAUAUUUAAUUCC C   A
UA           A                        C CAC
Stem-loop sequence UUAAAUUGAGAAUUUGUAGUUUUUUAUAAAUUGAGGAGAUCUACACCCCCUUAAUUUAUAAAAAACUGCAGAAUCUCAAUUUAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006591192.2
ncRNA:24   UAAAUUUAACUCUAAGACGUCAAA   1
  =|||*|||*|||||||*|||||||
targets:277   GUUUUAAUGGAGAUUCAGCAGUUU   300

2.5 PREDICTED: Glycine max cysteine-rich repeat secretory protein 15-like (LOC100806098), transcript variant X1, mRNA cysteine-rich repeat secretory protein 15-like(LOC100806098) coding protein psRNATarget