ncRNA ID | bra-miR395d-5p |
Species | Brassica rapa |
Class | miRNA |
Genome position | chrA2:11572546-11572653 [-] |
Reference genome | Brapa_1.1 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 71 - GUUCCUCUGAGCACUUCAUUG - 91 |
Stem-loop(if miRNA) |
GU      UU   UA         UG         U    UAUA      U  AU   CGGAUG  UCC  GAGUUCCUC  AGCACUUCA UGGA    ACAUUU CU  C   ||||||  |||  |||||||||  ||||||||| ||||    |||||| ||  A   GCUUAC  AGG  CUCAAGGGG  UUGUGAAGU AUCU    UGUAAA GA  A --      UC   UC         GU         C    --UA      -  AA |
Stem-loop sequence | GUCGGAUGUUUCCUAGAGUUCCUCUGAGCACUUCAUUGGAUAUAACAUUUUCUAUCAAAAAGAAAUGUAUUCUACUGAAGUGUUUGGGGGAACUCCUGGACUCAUUCG |
1 | PMID:24559317
"Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis"; Jiang J, Lv M, Liang Y, Ma Z, Cao J; BMC Genomics. 15:146(2014). |