ncRNA ID | novel_gma_miR428 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:41560798-41560932 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451630 |
Length | 24 |
Mature sequence(if miRNA) | 112 - AAAACCGAUGUUAACGAAGCGACG - 135 |
Stem-loop(if miRNA) |
--                                 A     UGCAUCGAUUUUUU      CG         UU   AAAACCGAUGUUAACGAAGCGACGUUAACAUCG UUUUU              GAAAAC  AUGUUAAGG  G   ||||||||||||||||||||||||||||||||| |||||              ||||||  |||||||||   UUUUGGCUACAAUUGCUUCGCUGCAAUUGUAGC AAAAG              UUUUUG  UACAAUUCC  C AG                                 C     -------------U      AU         UU |
Stem-loop sequence | AAAACCGAUGUUAACGAAGCGACGUUAACAUCGAUUUUUUGCAUCGAUUUUUUGAAAACCGAUGUUAAGGUUGCUUCCUUAACAUUAGUUUUUUGAAAACCGAUGUUAACGUCGCUUCGUUAACAUCGGUUUUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006588741.2 |
|
2.0 | PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102670366), transcript variant X2, mRNA | phosphoinositide phosphatase SAC1-like(LOC102670366) | coding protein | psRNATarget | |||||||||
XM_014763017.1 |
|
2.0 | PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102660101), transcript variant X1, mRNA | phosphoinositide phosphatase SAC1-like(LOC102660101) | coding protein | psRNATarget |