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BaseInfo

ncRNA ID novel_gma_miR414
Species Glycine max
Class miRNA
Genome position Chr5:38410198-38410299 [-]
Reference genome Glycine_max_v2.0
Source SRR1451630;SRR1451646
Length 24
Mature sequence(if miRNA) 1 - AUCAACAUGAUCCGUAUGAGUCAU - 24
Stem-loop(if miRNA) --A                     CC   CAAAC    CAGAUCAACUUGAU
   ACUCAUACGGAUUAUGUUGAU  GUA     CAUA              C
   |||||||||||||||||||||  |||     ||||              U
   UGAGUAUGCCUAGUACAACUA  CAU     UUAA              G
UAC                     CA   ---AC    UAUACUUAAAGUAU
Stem-loop sequence AACUCAUACGGAUUAUGUUGAUCCGUACAAACCAUACAGAUCAACUUGAUCUGUAUGAAAUUCAUAUAAUUCAUACACAUCAACAUGAUCCGUAUGAGUCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006600975.2
ncRNA:24   UACUGAGUAUGCCUAGUACAACUA   1
  |*|==|*||||||||||*||||||
targets:1180   AAGGUUGAUACGGAUCAAGUUGAU   1203

2.5 PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA basic leucine zipper 9-like(LOC100776831) coding protein psRNATarget