ncRNA ID | novel_gma_miR409 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:21352715-21352887 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451630;SRR1451631;SRR1451632;SRR1451634;SRR1451635;SRR1451639;SRR1451640;SRR1451641;SRR1451644;SRR1451646;SRR1451649;SRR3160568;SRR1295531;SRR1451613;SRR1451616;SRR1451621;SRR1451624;SRR1451626;SRR1451627 |
Length | 24 |
Mature sequence(if miRNA) | 150 - AGAAAACCGAUGUCAAUGUUGAUG - 173 |
Stem-loop(if miRNA) |
--UG                   C                 ---     UAGU                 GA    C        A  U     AACGUUGACAUCGGUUUUC AGUAAAACCGAUGUUAA   UAUGU    UUAACAUCGAUUUUUUA  AAAA CGAUGUUA UG A     ||||||||||||||||||| |||||||||||||||||   |||||    |||||||||||||||||  |||| |||||||| || A     UUGUAACUGUAGCCAAAAG UCGUUUUGGCUACAAUU   GUAUA    AAUUGUAGCUAAAAGGU  UUUU GCUACAAU AC U GUAG                   A                 CCC     ---U                 AA    A        A  A |
Stem-loop sequence | UGAACGUUGACAUCGGUUUUCCAGUAAAACCGAUGUUAAUAUGUUAGUUUAACAUCGAUUUUUUAGAAAAACCGAUGUUAAUGUAAUACAAUAACAUCGAUUUUAAUGGAAAAUCGAUGUUAAUAUAUGCCCUUAACAUCGGUUUUGCUAGAAAACCGAUGUCAAUGUUGAUG |