Search result

BaseInfo

ncRNA ID novel_gma_miR409
Species Glycine max
Class miRNA
Genome position Chr4:21352715-21352887 [+]
Reference genome Glycine_max_v2.0
Source SRR1451630;SRR1451631;SRR1451632;SRR1451634;SRR1451635;SRR1451639;SRR1451640;SRR1451641;SRR1451644;SRR1451646;SRR1451649;SRR3160568;SRR1295531;SRR1451613;SRR1451616;SRR1451621;SRR1451624;SRR1451626;SRR1451627
Length 24
Mature sequence(if miRNA) 150 - AGAAAACCGAUGUCAAUGUUGAUG - 173
Stem-loop(if miRNA) --UG                   C                 ---     UAGU                 GA    C        A  U
    AACGUUGACAUCGGUUUUC AGUAAAACCGAUGUUAA   UAUGU    UUAACAUCGAUUUUUUA  AAAA CGAUGUUA UG A
    ||||||||||||||||||| |||||||||||||||||   |||||    |||||||||||||||||  |||| |||||||| || A
    UUGUAACUGUAGCCAAAAG UCGUUUUGGCUACAAUU   GUAUA    AAUUGUAGCUAAAAGGU  UUUU GCUACAAU AC U
GUAG                   A                 CCC     ---U                 AA    A        A  A
Stem-loop sequence UGAACGUUGACAUCGGUUUUCCAGUAAAACCGAUGUUAAUAUGUUAGUUUAACAUCGAUUUUUUAGAAAAACCGAUGUUAAUGUAAUACAAUAACAUCGAUUUUAAUGGAAAAUCGAUGUUAAUAUAUGCCCUUAACAUCGGUUUUGCUAGAAAACCGAUGUCAAUGUUGAUG