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BaseInfo

ncRNA ID	novel_gma_miR398
Species	Glycine max
Class	miRNA
Genome position	Chr20:27256339-27256385 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451630;SRR1451654;SRR1451658;SRR3067737
Length	22
Mature sequence(if miRNA)	1 - UUUUGACCGUUGGGAUCUUCUA - 22
Stem-loop(if miRNA)	--    U       -ACA     A   GAGG UCCUAAU    GAAAU U   |||| |||||||    |||||   CUUC AGGGUUG    UUUUA A AU    U       CCAG     A
Stem-loop sequence	GAGGUUCCUAAUACAGAAAUAUAAAUUUUGACCGUUGGGAUCUUCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT093757.1	ncRNA:22   AUCUUCUAGGGUUGCCAGUUUU   1   ***|||||=||||||||||||* targets:687   ACAAAGAUUCCAACGGUCAAAC   708 Target Full Sequence	2.0	Soybean clone JCVI-FLGm-24K6 unknown mRNA	NA	coding protein	psRNATarget
BT094234.1	ncRNA:22   AUCUUCUAGGGUUGCCAGUUUU   1   ***|||=||||||||*|||||| targets:1050   ACCAAGGUCCCAACGAUCAAAA   1071 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-14D23 unknown mRNA	NA	coding protein	psRNATarget
XM_006572999.2	ncRNA:22   AUCUUCUAGGGUUGCCAGUUUU   1   ***|||=||||||||*|||||| targets:1110   ACCAAGGUCCCAACGAUCAAAA   1131 Target Full Sequence	2.5	PREDICTED: Glycine max serine/threonine-protein kinase CDL1 (LOC100796654), transcript variant X3, mRNA	serine/threonine-protein kinase CDL1(LOC100796654)	coding protein	psRNATarget
XM_006572996.2	ncRNA:22   AUCUUCUAGGGUUGCCAGUUUU   1   ***|||=||||||||*|||||| targets:1126   ACCAAGGUCCCAACGAUCAAAA   1147 Target Full Sequence	2.5	PREDICTED: Glycine max serine/threonine-protein kinase CDL1 (LOC100796654), transcript variant X1, mRNA	serine/threonine-protein kinase CDL1(LOC100796654)	coding protein	psRNATarget
XM_003517768.3	ncRNA:22   AUCUUCUAGGGUUGCCAGUUUU   1   ***|||=||||||||*|||||| targets:1211   ACCAAGGUCCCAACGAUCAAAA   1232 Target Full Sequence	2.5	PREDICTED: Glycine max serine/threonine-protein kinase CDL1 (LOC100796654), transcript variant X2, mRNA	serine/threonine-protein kinase CDL1(LOC100796654)	coding protein	psRNATarget
XM_006572997.2	ncRNA:22   AUCUUCUAGGGUUGCCAGUUUU   1   ***|||=||||||||*|||||| targets:1226   ACCAAGGUCCCAACGAUCAAAA   1247 Target Full Sequence	2.5	PREDICTED: Glycine max serine/threonine-protein kinase CDL1 (LOC100796654), transcript variant X4, mRNA	serine/threonine-protein kinase CDL1(LOC100796654)	coding protein	psRNATarget
XM_003519497.3	ncRNA:22   AUCUUCUAGGGUUGCCAGUUUU   1   ***|||=||||||||*|||||| targets:1736   ACCAAGGUCCCAACGAUCAAAA   1757 Target Full Sequence	2.5	PREDICTED: Glycine max serine/threonine-protein kinase CDL1-like (LOC100777910), transcript variant X1, mRNA	serine/threonine-protein kinase CDL1-like(LOC100777910)	coding protein	psRNATarget
XM_014778987.1	ncRNA:22   AUCUUCUAG-GGUUGCCAGUUUU   1   **|||||||-||||||||||||| targets:170   ACGAAGAUCUCCAACGGUCAAAA   192 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100820089 (LOC100820089), transcript variant X1, mRNA	uncharacterized LOC100820089(LOC100820089)	coding protein	psRNATarget
XM_014778989.1	ncRNA:22   AUCUUCUAG-GGUUGCCAGUUUU   1   **|||||||-||||||||||||| targets:15   ACGAAGAUCUCCAACGGUCAAAA   37 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100820089 (LOC100820089), transcript variant X4, mRNA	uncharacterized LOC100820089(LOC100820089)	coding protein	psRNATarget
XM_006585292.2	ncRNA:22   AUCUUCUAG-GGUUGCCAGUUUU   1   **|||||||-||||||||||||| targets:168   ACGAAGAUCUCCAACGGUCAAAA   190 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100820089 (LOC100820089), transcript variant X3, mRNA	uncharacterized LOC100820089(LOC100820089)	coding protein	psRNATarget
XM_014778988.1	ncRNA:22   AUCUUCUAG-GGUUGCCAGUUUU   1   **|||||||-||||||||||||| targets:3438   ACGAAGAUCUCCAACGGUCAAAA   3460 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100820089 (LOC100820089), transcript variant X2, mRNA	uncharacterized LOC100820089(LOC100820089)	coding protein	psRNATarget