ncRNA ID | novel_gma_miR394 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:30549159-30549343 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451630;SRR1451631;SRR1451632;SRR1451633;SRR1451634;SRR1451635;SRR1451637;SRR1451639;SRR1451640;SRR1451641;SRR1451644;SRR1451645;SRR1451646;SRR1451647;SRR1451649;SRR3160568;SRR1295531;SRR1451613;SRR1451615;SRR1451616;SRR1451621;SRR1451624;SRR1451625;SRR1451626;SRR1451627 |
Length | 24 |
Mature sequence(if miRNA) | 162 - AGAAAACCGAUGUCAAUGUUGAUG - 185 |
Stem-loop(if miRNA) |
--UG                   C                  AAGU   U            -  U   AAA                    UU     AACGUUGACAUCGGUUUUC AGUAAAACCGAUGUUAAU    UAU UUAACAUCGGUU UU UAG   AAACCGAUGUUAAUGUAUUG  A     ||||||||||||||||||| ||||||||||||||||||    ||| |||||||||||| || |||   ||||||||||||||||||||     UUGUAACUGUAGCCAAAAG UCGUUUUGGCUACAAUUA    AUA AAUUGUAGCCAA AG AUC   UUUGGCUACAAUUACAUAAU  A GUAG                   A                  CCUU   U            U  C   --C                    GU |
Stem-loop sequence | UGAACGUUGACAUCGGUUUUCCAGUAAAACCGAUGUUAAUAAGUUAUUUUAACAUCGGUUUUUUAGAAAAAACCGAUGUUAAUGUAUUGUUAAUGUAAUACAUUAACAUCGGUUUCCUACGAUAACCGAUGUUAAUAUAUUCCAUUAACAUCGGUUUUGCUAGAAAACCGAUGUCAAUGUUGAUG |