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BaseInfo

ncRNA ID novel_gma_miR392
Species Glycine max
Class miRNA
Genome position Chr20:2150207-2150267 [+]
Reference genome Glycine_max_v2.0
Source SRR1451630
Length 24
Mature sequence(if miRNA) 1 - UCCAUAGUGGUGAUUGUCAACCCG - 24
Stem-loop(if miRNA) --   A                C      A
  UCC UAGUGGUGAUUGUCAA CCGAAA U
  ||| |||||||||||||||| |||||| A
  GGG AUCAUUACUAACAGUU GGCUUU U
GU   C                A      G
Stem-loop sequence UCCAUAGUGGUGAUUGUCAACCCGAAAAUAUGUUUCGGAUUGACAAUCAUUACUACGGGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773063.1
ncRNA:24   GCCCAACUGUUAGUGGUGAUACCU   1
  ||||||||||||||||||||||||
targets:1259   CGGGUUGACAAUCACCACUAUGGA   1282

0.0 PREDICTED: Glycine max uncharacterized LOC102670399 (LOC102670399), transcript variant X2, mRNA uncharacterized LOC102670399(LOC102670399) coding protein psRNATarget
XM_006605453.2
ncRNA:24   GCCCAACUGUUAGUGGUGAUACCU   1
  ||||||||||||||||||||||||
targets:1668   CGGGUUGACAAUCACCACUAUGGA   1691

0.0 PREDICTED: Glycine max uncharacterized LOC102670399 (LOC102670399), transcript variant X1, mRNA uncharacterized LOC102670399(LOC102670399) coding protein psRNATarget