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BaseInfo

ncRNA ID novel_gma_miR391
Species Glycine max
Class miRNA
Genome position Chr20:19217049-19217177 [+]
Reference genome Glycine_max_v2.0
Source SRR1451630;SRR1451635;SRR1451639;SRR1451645;SRR1451647;SRR3160569;SRR1451617;SRR1451619;SRR1451620
Length 24
Mature sequence(if miRNA) 106 - UUCAGAGAACCGUCUUAGAAUGUC - 129
Stem-loop(if miRNA) --                                            A                A
  CAUUCUAAGACGGUUCUCUGAAAAACCGUCUUAGAAAAUUUAUC UUCUAAGACGGUUUUU A
  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| C
  GUAAGAUUCUGCCAAGAGACUUUUUGGCAGAAUCUUUUAGAUGG AAGAUUCUGCUAAGAA A
CU                                            G                A
Stem-loop sequence CAUUCUAAGACGGUUCUCUGAAAAACCGUCUUAGAAAAUUUAUCAUUCUAAGACGGUUUUUAACAAAAGAAUCGUCUUAGAAGGGUAGAUUUUCUAAGACGGUUUUUCAGAGAACCGUCUUAGAAUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:24   CUGUAAGAUUCUGCCAAGAGACUU   1
  *|||||||||||||||||||||||
targets:2608   UACAUUCUAAGACGGUUCUCUGAA   2631

0.0 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_014771087.1
ncRNA:24   CUGUAAGAUUCUGCCAAGAGACUU   1
  *||||||||||||||||||=||||
targets:2512   CACAUUCUAAGACGGUUCUUUGAA   2535

1.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_014763138.1
ncRNA:24   CUGUAAGAUUCUGCCAAGAGACUU   1
  *|||||||||||=|||||||||||
targets:1526   UACAUUCUAAGAUGGUUCUCUGAA   1549

1.5 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget
XM_006589010.2
ncRNA:24   CUGUAAGAUUCUGCCAAGAGACUU   1
  *|||||||||||=|||||||||||
targets:2235   UACAUUCUAAGAUGGUUCUCUGAA   2258

1.5 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget