ncRNA ID | novel_gma_miR391 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:19217049-19217177 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451630;SRR1451635;SRR1451639;SRR1451645;SRR1451647;SRR3160569;SRR1451617;SRR1451619;SRR1451620 |
Length | 24 |
Mature sequence(if miRNA) | 106 - UUCAGAGAACCGUCUUAGAAUGUC - 129 |
Stem-loop(if miRNA) |
--                                            A                A   CAUUCUAAGACGGUUCUCUGAAAAACCGUCUUAGAAAAUUUAUC UUCUAAGACGGUUUUU A   |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| C   GUAAGAUUCUGCCAAGAGACUUUUUGGCAGAAUCUUUUAGAUGG AAGAUUCUGCUAAGAA A CU                                            G                A |
Stem-loop sequence | CAUUCUAAGACGGUUCUCUGAAAAACCGUCUUAGAAAAUUUAUCAUUCUAAGACGGUUUUUAACAAAAGAAUCGUCUUAGAAGGGUAGAUUUUCUAAGACGGUUUUUCAGAGAACCGUCUUAGAAUGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014771087.1 |
|
0.0 | PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA | uncharacterized LOC102664939(LOC102664939) | coding protein | psRNATarget | |||||||||
XM_014771087.1 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA | uncharacterized LOC102664939(LOC102664939) | coding protein | psRNATarget | |||||||||
XM_014763138.1 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA | uncharacterized LOC100806242(LOC100806242) | coding protein | psRNATarget | |||||||||
XM_006589010.2 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA | uncharacterized LOC100806242(LOC100806242) | coding protein | psRNATarget |