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BaseInfo

ncRNA ID novel_gma_miR361
Species Glycine max
Class miRNA
Genome position Chr10:49169699-49169829 [-]
Reference genome Glycine_max_v2.0
Source SRR1451630;SRR1451633;SRR1451634;SRR1451635;SRR1451638;SRR1451641;SRR1451642;SRR1451644;SRR1451647;SRR1451648;SRR1451654;SRR1451657;SRR1451661;SRR1451663;SRR3160569;SRR835758;SRR835763;SRR1451627
Length 23
Mature sequence(if miRNA) 109 - AAGAAGAGCUUGAGGAAGUGAUG - 131
Stem-loop(if miRNA) AAGAA     U        G       A    A   -           --U       U UC  UGA
     GAGCU GAGGAAGU AUGGGAG UGGG GGG UCGGUAAAGGA   AACAGCG C  UA   U
     ||||| |||||||| ||||||| |||| ||| |||||||||||   ||||||| |  ||
     CUUGG UUCUUUUA UAUCCUU ACCC CCU AGCCGUUUUCU   UUGUUGU G  GU   U
CUUUC     U        G       -    A   U           UAU       - UU  UAA
Stem-loop sequence AAGAAGAGCUUGAGGAAGUGAUGGGAGAUGGGAGGGUCGGUAAAGGAUAACAGCGUCUCUAUGAUUAAUUGUUGUGUUGUUUAUUCUUUUGCCGAUUCCACCCAUUCCUAUGAUUUUCUUUGGUUCCUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003523428.3
ncRNA:23   GUAGUGAAGGAGUUCGAGAAGAA   1
  ==||*|||*|||||||||||||*
targets:255   UGUCCCUUACUCAAGCUCUUCUC   277

3.0 PREDICTED: Glycine max uncharacterized LOC100780985 (LOC100780985), transcript variant X1, mRNA uncharacterized LOC100780985(LOC100780985) coding protein psRNATarget
XM_014775011.1
ncRNA:23   GUAGUGAAGGAGUUCGAGAAGAA   1
  ==||*|||*|||||||||||||*
targets:110   UGUCCCUUACUCAAGCUCUUCUC   132

3.0 PREDICTED: Glycine max uncharacterized LOC100780985 (LOC100780985), transcript variant X3, mRNA uncharacterized LOC100780985(LOC100780985) coding protein psRNATarget
XM_006578935.2
ncRNA:23   GUAGUGAAGGAGUUCGAGAAGAA   1
  ==||*|||*|||||||||||||*
targets:255   UGUCCCUUACUCAAGCUCUUCUC   277

3.0 PREDICTED: Glycine max uncharacterized LOC100780985 (LOC100780985), transcript variant X2, mRNA uncharacterized LOC100780985(LOC100780985) coding protein psRNATarget