ncRNA ID | novel_gma_miR361 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:49169699-49169829 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451630;SRR1451633;SRR1451634;SRR1451635;SRR1451638;SRR1451641;SRR1451642;SRR1451644;SRR1451647;SRR1451648;SRR1451654;SRR1451657;SRR1451661;SRR1451663;SRR3160569;SRR835758;SRR835763;SRR1451627 |
Length | 23 |
Mature sequence(if miRNA) | 109 - AAGAAGAGCUUGAGGAAGUGAUG - 131 |
Stem-loop(if miRNA) |
AAGAA     U        G       A    A   -           --U       U UC  UGA      GAGCU GAGGAAGU AUGGGAG UGGG GGG UCGGUAAAGGA   AACAGCG C  UA   U      ||||| |||||||| ||||||| |||| ||| |||||||||||   ||||||| |  ||      CUUGG UUCUUUUA UAUCCUU ACCC CCU AGCCGUUUUCU   UUGUUGU G  GU   U CUUUC     U        G       -    A   U           UAU       - UU  UAA |
Stem-loop sequence | AAGAAGAGCUUGAGGAAGUGAUGGGAGAUGGGAGGGUCGGUAAAGGAUAACAGCGUCUCUAUGAUUAAUUGUUGUGUUGUUUAUUCUUUUGCCGAUUCCACCCAUUCCUAUGAUUUUCUUUGGUUCCUUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003523428.3 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100780985 (LOC100780985), transcript variant X1, mRNA | uncharacterized LOC100780985(LOC100780985) | coding protein | psRNATarget | |||||||||
XM_014775011.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100780985 (LOC100780985), transcript variant X3, mRNA | uncharacterized LOC100780985(LOC100780985) | coding protein | psRNATarget | |||||||||
XM_006578935.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100780985 (LOC100780985), transcript variant X2, mRNA | uncharacterized LOC100780985(LOC100780985) | coding protein | psRNATarget |