ncRNA ID | novel_gma_miR342 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:11151370-11151501 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451629;SRR1295525;SRR1294476 |
Length | 24 |
Mature sequence(if miRNA) | 109 - AUUUCGUUGUGUAUUUUUGGUCCC - 132 |
Stem-loop(if miRNA) |
--    CG            ---G     C          ACA          GU    GU      G   AUUU  UUGUGUAUUUUU    GUCCC AAACAACACA   AAAUCAUGUU  CAUU  GUAUUU U   ||||  ||||||||||||    ||||| ||||||||||   ||||||||||  ||||  ||||||   UAAG  AACAUAUAAAAA    CAGGG UUUGUUGUGU   UUUAGUAUAA  GUAA  CAUAAA A AC    AU            AAGA     -          CAC          AG    AC      A |
Stem-loop sequence | AUUUCGUUGUGUAUUUUUGGUCCCCAAACAACACAACAAAAUCAUGUUGUCAUUGUGUAUUUGUAAAAAUACCAAAUGGAAAUAUGAUUUCACUGUGUUGUUUGGGACAGAAAAAAAUAUACAAUAGAAUCA |