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BaseInfo

ncRNA ID novel_gma_miR340
Species Glycine max
Class miRNA
Genome position Chr20:5258586-5258786 [+]
Reference genome Glycine_max_v2.0
Source SRR1294478;SRR1294479;SRR2045231;SRR2045232
Length 24
Mature sequence(if miRNA) 178 - AAUUAGAGAACCAAAUUGAACCCA - 201
Stem-loop(if miRNA) --             CU      C       --CU  A   U      CCU      ---U     AA     C   G   U     -  GCA           CU
  GGUUCAAUUUGGU  UCUAAU UUUAAAA    GA UCA UUUGGU   UUUGCC    AAAUU  AUUAA GGU UUA GAAAU GU   UUUUGUGGCGG  U
  |||||||||||||  |||||| |||||||    || ||| ||||||   ||||||    |||||  ||||| ||| ||| ||||| ||   |||||||||||  U
  CCAAGUUAAACCA  AGAUUA AAAUUUU    CU AGU AAACCA   AGAUGG    UUUAA  UAGUU CUA AAU CUUUA CA   GAAACACCGUC  A
AC             AG      -       UAAU  A   U      ---      CAGU     CC     A   G   U     A  --A           AA
Stem-loop sequence GGUUCAAUUUGGUCUUCUAAUCUUUAAAACUGAAUCAUUUUGGUCCUUUUGCCUAAAUUAAAUUAACGGUGUUAUGAAAUGUGCAUUUUGUGGCGGCUUUAAACUGCCACAAAGAACAAUUUCUUAAGAUCAUUGAUCCAAUUUUGACGGUAGAACCAAAUUGAAUCUAAUUUUUAAAAUUAGAGAACCAAAUUGAACCCA