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BaseInfo

ncRNA ID	novel_gma_miR317
Species	Glycine max
Class	miRNA
Genome position	Chr20:40911413-40911489 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1294478
Length	19
Mature sequence(if miRNA)	1 - UAUAAAUAGGACCAGAGGU - 19
Stem-loop(if miRNA)	--  A  U                C  A    A        CU UG UCCUAUUUAUAAGAAA AA UUGU GUGUAA   || || |||||||||||||||| || |||| |||||A   GA AC AGGAUAAAUAUUCUUU UU AACA UAUAUA UG  G  C                U  A    A
Stem-loop sequence	CUAUGUUCCUAUUUAUAAGAAACAAAUUGUAGUGUAAAAUAUAUAACAAAUUUUUUCUUAUAAAUAGGACCAGAGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003541465.3	ncRNA:19   UGGAGACCAGGAUAAAUAU   1   =|||||||||||||||||| targets:1565   GCCUCUGGUCCUAUUUAUA   1583 Target Full Sequence	1.0	PREDICTED: Glycine max peroxidase 19 (LOC100777463), mRNA	peroxidase 19(LOC100777463)	coding protein	psRNATarget
XM_014764194.1	ncRNA:19   UGGAGACCAGGAUAAAUAU   1   =|||||||||||*|||||| targets:680   GCCUCUGGUCCUUUUUAUA   698 Target Full Sequence	2.5	PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X9, mRNA	COX assembly mitochondrial protein 2 homolog(LOC100789163)	coding protein	psRNATarget
XM_006591237.2	ncRNA:19   UGGAGACCAGGAUAAAUAU   1   =|||||||||||*|||||| targets:692   GCCUCUGGUCCUUUUUAUA   710 Target Full Sequence	2.5	PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X8, mRNA	COX assembly mitochondrial protein 2 homolog(LOC100789163)	coding protein	psRNATarget
XM_006591232.2	ncRNA:19   UGGAGACCAGGAUAAAUAU   1   =|||||||||||*|||||| targets:717   GCCUCUGGUCCUUUUUAUA   735 Target Full Sequence	2.5	PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X3, mRNA	COX assembly mitochondrial protein 2 homolog(LOC100789163)	coding protein	psRNATarget
XM_006591234.2	ncRNA:19   UGGAGACCAGGAUAAAUAU   1   =|||||||||||*|||||| targets:879   GCCUCUGGUCCUUUUUAUA   897 Target Full Sequence	2.5	PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X4, mRNA	COX assembly mitochondrial protein 2 homolog(LOC100789163)	coding protein	psRNATarget
XM_006591233.2	ncRNA:19   UGGAGACCAGGAUAAAUAU   1   =|||||||||||*|||||| targets:884   GCCUCUGGUCCUUUUUAUA   902 Target Full Sequence	2.5	PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X2, mRNA	COX assembly mitochondrial protein 2 homolog(LOC100789163)	coding protein	psRNATarget
XM_014764193.1	ncRNA:19   UGGAGACCAGGAUAAAUAU   1   =|||||||||||*|||||| targets:929   GCCUCUGGUCCUUUUUAUA   947 Target Full Sequence	2.5	PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X7, mRNA	COX assembly mitochondrial protein 2 homolog(LOC100789163)	coding protein	psRNATarget
XM_006591236.2	ncRNA:19   UGGAGACCAGGAUAAAUAU   1   =|||||||||||*|||||| targets:940   GCCUCUGGUCCUUUUUAUA   958 Target Full Sequence	2.5	PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X5, mRNA	COX assembly mitochondrial protein 2 homolog(LOC100789163)	coding protein	psRNATarget
XM_003538317.3	ncRNA:19   UGGAGACCAGGAUAAAUAU   1   =|||||||||||*|||||| targets:961   GCCUCUGGUCCUUUUUAUA   979 Target Full Sequence	2.5	PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X1, mRNA	COX assembly mitochondrial protein 2 homolog(LOC100789163)	coding protein	psRNATarget
XM_006591235.2	ncRNA:19   UGGAGACCAGGAUAAAUAU   1   =|||||||||||*|||||| targets:973   GCCUCUGGUCCUUUUUAUA   991 Target Full Sequence	2.5	PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X6, mRNA	COX assembly mitochondrial protein 2 homolog(LOC100789163)	coding protein	psRNATarget