Search result

BaseInfo

ncRNA ID novel_gma_miR315
Species Glycine max
Class miRNA
Genome position Chr5:34751731-34751810 [+]
Reference genome Glycine_max_v2.0
Source SRR1451629;SRR1451627
Length 21
Mature sequence(if miRNA) 60 - UGAUUAAAAAGUGUAUGUGUA - 80
Stem-loop(if miRNA) --                  U      AUC   AUG   U
  CACAUACACUUUUUAAUC GUUUUA   CCU   AUU U
  |||||||||||||||||| ||||||   |||   |||
  GUGUAUGUGAAAAAUUAG CAAAAU   GGA   UAA U
AU                  U      CAA   CCA   G
Stem-loop sequence CACAUACACUUUUUAAUCUGUUUUAAUCCCUAUGAUUUUUGAAUACCAGGAACUAAAACUGAUUAAAAAGUGUAUGUGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766217.1
ncRNA:21   AUGUGUAUGUGAAAAAUUAGU   1
  *|*|||*=|||||||||||||
targets:38   AAAACAAGCACUUUUUAAUCA   58

3.0 PREDICTED: Glycine max probable inactive receptor kinase At1g27190 (LOC100814544), mRNA probable inactive receptor kinase At1g27190(LOC100814544) coding protein psRNATarget