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BaseInfo

ncRNA ID	novel_gma_miR308
Species	Glycine max
Class	miRNA
Genome position	Chr4:52130925-52130987 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451629
Length	21
Mature sequence(if miRNA)	1 - UGCAUAAGUUGGUUUUAGCUU - 21
Stem-loop(if miRNA)	--                    CUC      U   GCUAAAAUCAACUUAUGCAC   AGCUUU G   ||||||||||||||||||||   ||||||   CGAUUUUGGUUGAAUACGUG   UUGAAG G UU                    -AA      A
Stem-loop sequence	GCUAAAAUCAACUUAUGCACCUCAGCUUUUGGAGAAGUUAAGUGCAUAAGUUGGUUUUAGCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI410449.1	ncRNA:21   UUCGAUUUUGGUUGAAUACGU   1   |||=|||||=||||||||||| targets:7   AAGUUAAAAUCAACUUAUGCA   27 Target Full Sequence	2.5	Sequence 8574 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242579.1	ncRNA:21   UUCGAUUUUGGUUGAAUACGU   1   |||=|||||=||||||||||| targets:7   AAGUUAAAAUCAACUUAUGCA   27 Target Full Sequence	2.5	Sequence 8574 from Patent EP2985353	NA	coding protein	psRNATarget
JB170910.1	ncRNA:21   UUCGAUUUUGGUUGAAUACGU   1   |||=|||||=||||||||||| targets:7   AAGUUAAAAUCAACUUAUGCA   27 Target Full Sequence	2.5	Sequence 8574 from Patent EP2559767	NA	coding protein	psRNATarget
BT095764.1	ncRNA:21   UUCGAUUUUGGUUGAAUACGU   1   |||=|||||=||||||||||| targets:996   AAGUUAAAAUCAACUUAUGCA   1016 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-15K19 unknown mRNA	NA	coding protein	psRNATarget
XM_003518975.3	ncRNA:21   UUCGAUUUUGGUUGAAUACGU   1   |||=|||||=||||||||||| targets:1046   AAGUUAAAAUCAACUUAUGCA   1066 Target Full Sequence	2.5	PREDICTED: Glycine max binding partner of ACD11 1 (LOC100805907), transcript variant X3, mRNA	binding partner of ACD11 1(LOC100805907)	coding protein	psRNATarget
XM_006574485.2	ncRNA:21   UUCGAUUUUGGUUGAAUACGU   1   |||=|||||=||||||||||| targets:1067   AAGUUAAAAUCAACUUAUGCA   1087 Target Full Sequence	2.5	PREDICTED: Glycine max binding partner of ACD11 1 (LOC100805907), transcript variant X2, mRNA	binding partner of ACD11 1(LOC100805907)	coding protein	psRNATarget
XM_006574484.2	ncRNA:21   UUCGAUUUUGGUUGAAUACGU   1   |||=|||||=||||||||||| targets:1079   AAGUUAAAAUCAACUUAUGCA   1099 Target Full Sequence	2.5	PREDICTED: Glycine max binding partner of ACD11 1 (LOC100805907), transcript variant X1, mRNA	binding partner of ACD11 1(LOC100805907)	coding protein	psRNATarget
XM_006593880.2	ncRNA:21   UUCGAUUUUGGUUGAAUACGU   1   =||=|||||=||||||||||| targets:2973   GAGUUAAAAUCAACUUAUGCA   2993 Target Full Sequence	2.5	PREDICTED: Glycine max phospholipid:diacylglycerol acyltransferase 1-like (LOC100779225), transcript variant X3, mRNA	phospholipid:diacylglycerol acyltransferase 1-like(LOC100779225)	coding protein	psRNATarget
XM_003541248.3	ncRNA:21   UUCGAUUUUGGUUGAAUACGU   1   =||=|||||=||||||||||| targets:3127   GAGUUAAAAUCAACUUAUGCA   3147 Target Full Sequence	2.5	PREDICTED: Glycine max phospholipid:diacylglycerol acyltransferase 1-like (LOC100779225), transcript variant X1, mRNA	phospholipid:diacylglycerol acyltransferase 1-like(LOC100779225)	coding protein	psRNATarget
XM_003520082.3	ncRNA:21   UUCGAUUUUGGUUGAAUACGU   1   =|||||||||||||*|||||* targets:2043   GAGCUAAAACCAACAUAUGCU   2063 Target Full Sequence	2.5	PREDICTED: Glycine max receptor-like protein kinase FERONIA (LOC100776324), mRNA	receptor-like protein kinase FERONIA(LOC100776324)	coding protein	psRNATarget
XM_003540904.3	ncRNA:21   UUCGAUUUUGGUUGAAUACGU   1   ||||*|||||||||||*|||| targets:334   AAGCCAAAACCAACUUUUGCA   354 Target Full Sequence	2.5	PREDICTED: Glycine max LOB domain-containing protein 2-like (LOC100809173), mRNA	LOB domain-containing protein 2-like(LOC100809173)	coding protein	psRNATarget
XM_003556356.3	ncRNA:21   UUCGAUUUUGGUUGAAUACGU   1   ||*|*||=||||||||||||| targets:1229   AACCGAAGACCAACUUAUGCA   1249 Target Full Sequence	3.0	PREDICTED: Glycine max CLP protease regulatory subunit CLPX3, mitochondrial (LOC100818418), mRNA	CLP protease regulatory subunit CLPX3, mitochondrial(LOC100818418)	coding protein	psRNATarget