Search result

BaseInfo

ncRNA ID	novel_gma_miR307
Species	Glycine max
Class	miRNA
Genome position	Chr4:42017764-42017844 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451629;SRR1451648
Length	21
Mature sequence(if miRNA)	61 - CAAGAAAAUGAAUGGUGAGGA - 81
Stem-loop(if miRNA)	--           C       A   C   --U    -  AAU   CUCACCAUUCA UUUCUUG AAU UAA   GGUU GU   A   ||||||||||| ||||||| ||| |||   |||| ||   GAGUGGUAAGU AAAGAAC UUA AUU   CUAA CA   A AG           A       C   A   CUU    U  CUG
Stem-loop sequence	CUCACCAUUCACUUUCUUGAAAUCUAAUGGUUGUAAUAAGUCACUAAUCUUCUUAAAUUCCAAGAAAAUGAAUGGUGAGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003520509.3	ncRNA:21   AGGAGUGGUAAGUAAAAGAAC   1   *||||||*||||||||||||* targets:2366   ACCUCACAAUUCAUUUUCUUU   2386 Target Full Sequence	2.0	PREDICTED: Glycine max isoamylase 2, chloroplastic-like (LOC100797949), mRNA	isoamylase 2, chloroplastic-like(LOC100797949)	coding protein	psRNATarget
XM_014773545.1	ncRNA:21   AGGAGUGGUAAGUAAAAGAAC   1   *=||||||||||||*|||||* targets:805   AUCUCACCAUUCAUCUUCUUU   825 Target Full Sequence	2.5	PREDICTED: Glycine max protein NRT1/ PTR FAMILY 4.3-like (LOC106798051), mRNA	protein NRT1/ PTR FAMILY 4.3-like(LOC106798051)	coding protein	psRNATarget
XM_014768433.1	ncRNA:21   AGGAGUGGUAAGUAAAAGAAC   1   *||||*|||||||||||||*| targets:155   CCCUCUCCAUUCAUUUUCUCG   175 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor ICE1-like (LOC100804797), transcript variant X1, mRNA	transcription factor ICE1-like(LOC100804797)	coding protein	psRNATarget
BT090117.1	ncRNA:21   AGGA-GUGGUAAGUAAAAGAAC   1   ||||-||||||||||||||||* targets:90   UCCUUCACCAUUCAUUUUCUUU   111 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-3N9 unknown mRNA	NA	coding protein	psRNATarget
NM_001251455.2	ncRNA:21   AGGA-GUGGUAAGUAAAAGAAC   1   ||||-||||||||||||||||* targets:88   UCCUUCACCAUUCAUUUUCUUU   109 Target Full Sequence	3.0	Glycine max response regulator ARR6-like (LOC100306152), mRNA	uncharacterized LOC100306152(LOC100306152)	coding protein	psRNATarget