ncRNA ID | novel_gma_miR299 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:36443555-36443705 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294478;SRR1451639;SRR1451644;SRR1451649;SRR1451655;SRR1451662;SRR1451664;SRR2045228;SRR2968974;SRR1295516;SRR835759;SRR835766;SRR835767;SRR835768;SRR1295524;SRR1451604;SRR1451605;SRR1451608;SRR1451612;SRR1294476;SRR1451621;SRR1451626 |
Length | 21 |
Mature sequence(if miRNA) | 131 - UGAUUUCCUUCGGUUCCUCUC - 151 |
Stem-loop(if miRNA) |
    A     U        G       A    A   -         -------------      --U      ---C    CU GAGA GAGCU GAGGAAGU AUGGGAG UGGG GGG UCGGUAAAG             AAUAUA   CUGAGA    UCGA  C |||| ||||| |||||||| ||||||| |||| ||| |||||||||             ||||||   ||||||    ||||  A CUCU CUUGG UUCCUUUA UAUCCUU ACCC CCU AGCCGUUUU             UUGUGU   GACUCU    AGCU  A     C     C        G       -    A   U         CCUAUUUGUUUUG      UGU      CUCU    CU |
Stem-loop sequence | GAGAAGAGCUUGAGGAAGUGAUGGGAGAUGGGAGGGUCGGUAAAGAAUAUAUCUGAGACUCGACUCAAUCUCGAUCUCUCUCAGUGUUGUGUUGUUUUGUUUAUCCUUUUGCCGAUUCCACCCAUUCCUAUGAUUUCCUUCGGUUCCUCUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003535524.2 |
|
2.0 | PREDICTED: Glycine max serine decarboxylase 1-like (LOC100781665), mRNA | serine decarboxylase 1-like(LOC100781665) | coding protein | psRNATarget |