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BaseInfo

ncRNA ID novel_gma_miR299
Species Glycine max
Class miRNA
Genome position Chr20:36443555-36443705 [+]
Reference genome Glycine_max_v2.0
Source SRR1294478;SRR1451639;SRR1451644;SRR1451649;SRR1451655;SRR1451662;SRR1451664;SRR2045228;SRR2968974;SRR1295516;SRR835759;SRR835766;SRR835767;SRR835768;SRR1295524;SRR1451604;SRR1451605;SRR1451608;SRR1451612;SRR1294476;SRR1451621;SRR1451626
Length 21
Mature sequence(if miRNA) 131 - UGAUUUCCUUCGGUUCCUCUC - 151
Stem-loop(if miRNA)     A     U        G       A    A   -         -------------      --U      ---C    CU
GAGA GAGCU GAGGAAGU AUGGGAG UGGG GGG UCGGUAAAG             AAUAUA   CUGAGA    UCGA  C
|||| ||||| |||||||| ||||||| |||| ||| |||||||||             ||||||   ||||||    ||||  A
CUCU CUUGG UUCCUUUA UAUCCUU ACCC CCU AGCCGUUUU             UUGUGU   GACUCU    AGCU  A
    C     C        G       -    A   U         CCUAUUUGUUUUG      UGU      CUCU    CU
Stem-loop sequence GAGAAGAGCUUGAGGAAGUGAUGGGAGAUGGGAGGGUCGGUAAAGAAUAUAUCUGAGACUCGACUCAAUCUCGAUCUCUCUCAGUGUUGUGUUGUUUUGUUUAUCCUUUUGCCGAUUCCACCCAUUCCUAUGAUUUCCUUCGGUUCCUCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003535524.2
ncRNA:21   CUCUCCUUGGCUUCCUUUAGU   1
  *=|*||||||||||||||||*
targets:665   CGGUGGAACCGAAGGAAAUCU   685

2.0 PREDICTED: Glycine max serine decarboxylase 1-like (LOC100781665), mRNA serine decarboxylase 1-like(LOC100781665) coding protein psRNATarget