Search result

BaseInfo

ncRNA ID novel_gma_miR295
Species Glycine max
Class miRNA
Genome position Chr2:29921264-29921410 [-]
Reference genome Glycine_max_v2.0
Source SRR1451629;SRR1451632;SRR1451633;SRR1451642;SRR1451620
Length 22
Mature sequence(if miRNA) 126 - UCACCAAUCUGUGCUUCUUCCU - 147
Stem-loop(if miRNA) --U               C      G        G                  A          -GU       
   CACCAAUCUGUGCUU UUCCUC UCUAUCAG UCAAUAUCUUUCCUUUCA CUUUUGUUUU   AAAUUACA
   ||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||   |||||||G
   GUGGUUAGGCACGGA AAGGAG AGAUGGUC AGUUAUAGAAAGGAAAGU GGAAACGAAA   UUUGAUGU
GUC               C      G        G                  -          ACU       
Stem-loop sequence UCACCAAUCUGUGCUUCUUCCUCGUCUAUCAGGUCAAUAUCUUUCCUUUCAACUUUUGUUUUGUAAAUUACAGUGUAGUUUUCAAAAGCAAAGGUGAAAGGAAAGAUAUUGAGCUGGUAGAGGAGGAACAGGCACGGAUUGGUGCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014769888.1
ncRNA:22   UCCUUCUUCGUGUCUAACCACU   1
  =*|||||||||||||*||||||
targets:3438   GCGAAGAAGCACAGAGUGGUGA   3459

1.5 PREDICTED: Glycine max uncharacterized LOC100792447 (LOC100792447), mRNA uncharacterized LOC100792447(LOC100792447) coding protein psRNATarget
XM_003531577.3
ncRNA:22   UC--CUUCUUCGUGUCUAACCACU   1
  ||--||||||**||||||||||||
targets:2743   AGAAGAAGAAAAACAGAUUGGUGA   2766

2.5 PREDICTED: Glycine max ABC transporter C family member 8-like (LOC100784827), mRNA ABC transporter C family member 8-like(LOC100784827) coding protein psRNATarget