ncRNA ID | novel_gma_miR295 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:29921264-29921410 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451629;SRR1451632;SRR1451633;SRR1451642;SRR1451620 |
Length | 22 |
Mature sequence(if miRNA) | 126 - UCACCAAUCUGUGCUUCUUCCU - 147 |
Stem-loop(if miRNA) |
--U               C      G        G                  A          -GU           CACCAAUCUGUGCUU UUCCUC UCUAUCAG UCAAUAUCUUUCCUUUCA CUUUUGUUUU   AAAUUACA    ||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||   |||||||G    GUGGUUAGGCACGGA AAGGAG AGAUGGUC AGUUAUAGAAAGGAAAGU GGAAACGAAA   UUUGAUGU GUC               C      G        G                  -          ACU        |
Stem-loop sequence | UCACCAAUCUGUGCUUCUUCCUCGUCUAUCAGGUCAAUAUCUUUCCUUUCAACUUUUGUUUUGUAAAUUACAGUGUAGUUUUCAAAAGCAAAGGUGAAAGGAAAGAUAUUGAGCUGGUAGAGGAGGAACAGGCACGGAUUGGUGCUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014769888.1 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC100792447 (LOC100792447), mRNA | uncharacterized LOC100792447(LOC100792447) | coding protein | psRNATarget | |||||||||
XM_003531577.3 |
|
2.5 | PREDICTED: Glycine max ABC transporter C family member 8-like (LOC100784827), mRNA | ABC transporter C family member 8-like(LOC100784827) | coding protein | psRNATarget |