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BaseInfo

ncRNA ID	novel_gma_miR288
Species	Glycine max
Class	miRNA
Genome position	Chr20:40750566-40750731 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451629;SRR1451630;SRR1451634;SRR1451636;SRR1451638;SRR1451646;SRR1451648;SRR1451613;SRR1451615;SRR1451617;SRR1451619;SRR1451620;SRR1451622;SRR1451627
Length	21
Mature sequence(if miRNA)	146 - UACGCCAAAUUGGUCCUUCUG - 166
Stem-loop(if miRNA)	--        A      C      C  A    CAC      ACCGU   C     C   --------CA        AUCCAUCUAA     UA   UACGCCAA UUGGUC UUCUGU AG UUAC   ACUAAC     UCA UUUGG UGA          UGGCAAAC          UGUGA  U   |||||||| |||||| |||||| || ||||   ||||||     ||| ||||| |||          ||||||||          |||||   AUGUGGUU AACCAG AAGACA UC AAUG   UGAUUG     AGU GAAUC ACU          ACCGUUUG          ACAUU  C UA        C      A      A  A    --A      -AAUU   U     -   AUCACUAUAC        ----------     CU
Stem-loop sequence	UACGCCAAAUUGGUCCUUCUGUCAGAUUACCACACUAACACCGUUCACUUUGGCUGACAUGGCAAACAUCCAUCUAAUGUGAUAUCUCUUACAGUUUGCCACAUAUCACUAUCACUAAGUUGAUUAAGUUAGUAGUAAACUAACAGAAAGACCAACUUGGUGUAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006598714.2	ncRNA:21   GUCUUCCUGGUUAAACCGCAU   1   **|=||||||||||||||*|| targets:903   GUGGAGGACCAAUUUGGCUUA   923 Target Full Sequence	2.5	PREDICTED: Glycine max methionine S-methyltransferase (LOC100803724), transcript variant X2, mRNA	methionine S-methyltransferase(LOC100803724)	coding protein	psRNATarget
XM_003539331.3	ncRNA:21   GUCUUCCUGGUUAAACCGCAU   1   **|=||||||||||||||*|| targets:901   GUGGAGGACCAAUUUGGCUUA   921 Target Full Sequence	2.5	PREDICTED: Glycine max methionine S-methyltransferase-like (LOC100800262), mRNA	methionine S-methyltransferase-like(LOC100800262)	coding protein	psRNATarget
XM_003547816.3	ncRNA:21   GUCUUCCUGGUUAAACCGCAU   1   **|=||||||||||||||*|| targets:887   GUGGAGGACCAAUUUGGCUUA   907 Target Full Sequence	2.5	PREDICTED: Glycine max methionine S-methyltransferase (LOC100803724), transcript variant X1, mRNA	methionine S-methyltransferase(LOC100803724)	coding protein	psRNATarget
AK287323.1	ncRNA:21   GUCUUCCUGGUUAAACCGCAU   1   **|=||||||||||||||*|| targets:889   GUGGAGGACCAAUUUGGCUUA   909 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-49-L14	NA	coding protein	psRNATarget