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BaseInfo

ncRNA ID novel_gma_miR284
Species Glycine max
Class miRNA
Genome position Chr20:37264048-37264139 [+]
Reference genome Glycine_max_v2.0
Source SRR1451629;SRR835767;SRR1451616
Length 21
Mature sequence(if miRNA) 1 - UCAUACUCAACCCAACCUUUU - 21
Stem-loop(if miRNA) --     C    C    C         -----------------       A  
  UCAUA UCAA CCAA CUUUUCUUU                 GGAAGUC CGA
  ||||| |||| |||| |||||||||                 ||||||| ||C
  GGUAU AGUU GGUU GAAGAGGAA                 UCUUCGG GCU
AA     C    A    A         AAUGUGUUCUUAACCCC       A  
Stem-loop sequence UCAUACUCAACCCAACCUUUUCUUUGGAAGUCACGACUCGAGGCUUCUCCCCAAUUCUUGUGUAAAAGGAGAAGAUUGGAUUGACUAUGGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006583485.2
ncRNA:21   UUUUCCAACCCAACUCAUACU   1
  |*=|*||||||||||||||||
targets:1316   AUGACGUUGGGUUGAGUAUGA   1336

2.0 PREDICTED: Glycine max metalloendoproteinase 4-MMP-like (LOC100781237), mRNA metalloendoproteinase 4-MMP-like(LOC100781237) coding protein psRNATarget