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BaseInfo

ncRNA ID novel_gma_miR269
Species Glycine max
Class miRNA
Genome position Chr1:7583279-7583384 [+]
Reference genome Glycine_max_v2.0
Source SRR1451629;SRR1451634;SRR1451641;SRR1753104;SRR1451617;SRR1451618;SRR1451621;SRR1451624
Length 22
Mature sequence(if miRNA) 1 - AAGGUUGGGAGUGAAGAAGCCU - 22
Stem-loop(if miRNA) -AAGGUUG    UG     ---------G  UUCGGGAUUGAAAACUUAUCAUCUUU
        GGAG  AAGAA          CC                          G
        ||||  |||||          ||
        UCUC  UUCUU          UA                          A
UUUUUGAA    GU     UUCCAAUCAA  ACUGAUAUUAGGAGAAUUAGUAAAAG
Stem-loop sequence AAGGUUGGGAGUGAAGAAGCCUUCGGGAUUGAAAACUUAUCAUCUUUGAGAAAAUGAUUAAGAGGAUUAUAGUCAAUAACUAACCUUUUCUUUGCUCUAAGUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT098156.1
ncRNA:22   UCCGAAGAAGUGAGGGUUGGAA   1
  =*|||*|||||||||=||||||
targets:609   GUGCUGCUUCACUCCUAACCUU   630

2.5 Soybean clone JCVI-FLGm-22N24 unknown mRNA NA coding protein psRNATarget
XM_006605210.1
ncRNA:22   UCCGAAGAAGUGAGGGUUGGAA   1
  ***||||||||||||||||=|*
targets:203   CUUCUUCUUCACUCCCAACUUC   224

2.5 PREDICTED: Glycine max putative uncharacterized protein DDB_G0290521 (LOC102670397), mRNA putative uncharacterized protein DDB_G0290521(LOC102670397) coding protein psRNATarget