ncRNA ID | novel_gma_miR269 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:7583279-7583384 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451629;SRR1451634;SRR1451641;SRR1753104;SRR1451617;SRR1451618;SRR1451621;SRR1451624 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AAGGUUGGGAGUGAAGAAGCCU - 22 |
Stem-loop(if miRNA) |
-AAGGUUG    UG     ---------G  UUCGGGAUUGAAAACUUAUCAUCUUU         GGAG  AAGAA          CC                          G         ||||  |||||          ||         UCUC  UUCUU          UA                          A UUUUUGAA    GU     UUCCAAUCAA  ACUGAUAUUAGGAGAAUUAGUAAAAG |
Stem-loop sequence | AAGGUUGGGAGUGAAGAAGCCUUCGGGAUUGAAAACUUAUCAUCUUUGAGAAAAUGAUUAAGAGGAUUAUAGUCAAUAACUAACCUUUUCUUUGCUCUAAGUUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT098156.1 |
|
2.5 | Soybean clone JCVI-FLGm-22N24 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_006605210.1 |
|
2.5 | PREDICTED: Glycine max putative uncharacterized protein DDB_G0290521 (LOC102670397), mRNA | putative uncharacterized protein DDB_G0290521(LOC102670397) | coding protein | psRNATarget |