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BaseInfo

ncRNA ID	novel_gma_miR258
Species	Glycine max
Class	miRNA
Genome position	Chr17:19879546-19879604 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451629;SRR1295517
Length	24
Mature sequence(if miRNA)	36 - AUCCAGUAGAGAAGCUCUCAAAAG - 59
Stem-loop(if miRNA)	--                     A        UUUGAGAGCUUCUCUAUUGGA AUAUAG   ||||||||||||||||||||| |||||A   AAACUCUCGAAGAGAUGACCU UAUAUG GA                     A
Stem-loop sequence	UUUGAGAGCUUCUCUAUUGGAAAUAUAGAGUAUAUAUCCAGUAGAGAAGCUCUCAAAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014774046.1	ncRNA:24   GAAAACUCUCGAAGAGAUGACCUA   1   |||||||||||||||||||*|||* targets:604   CUUUUGAGAGCUUCUCUACCGGAA   627 Target Full Sequence	2.5	PREDICTED: Glycine max exosome complex component RRP41-like (LOC106798118), transcript variant X2, mRNA	exosome complex component RRP41-like(LOC106798118)	coding protein	psRNATarget
XM_014774047.1	ncRNA:24   GAAAACUCUCGAAGAGAUGACCUA   1   |||||||||||||||||||*|||* targets:783   CUUUUGAGAGCUUCUCUACCGGAA   806 Target Full Sequence	2.5	PREDICTED: Glycine max exosome complex component RRP41-like (LOC106798118), transcript variant X3, mRNA	exosome complex component RRP41-like(LOC106798118)	coding protein	psRNATarget
XM_014774048.1	ncRNA:24   GAAAACUCUCGAAGAGAUGACCUA   1   |||||||||||||||||||*|||* targets:802   CUUUUGAGAGCUUCUCUACCGGAA   825 Target Full Sequence	2.5	PREDICTED: Glycine max exosome complex component RRP41-like (LOC106798118), transcript variant X4, mRNA	exosome complex component RRP41-like(LOC106798118)	coding protein	psRNATarget
XM_014774045.1	ncRNA:24   GAAAACUCUCGAAGAGAUGACCUA   1   |||||||||||||||||||*|||* targets:880   CUUUUGAGAGCUUCUCUACCGGAA   903 Target Full Sequence	2.5	PREDICTED: Glycine max exosome complex component RRP41-like (LOC106798118), transcript variant X1, mRNA	exosome complex component RRP41-like(LOC106798118)	coding protein	psRNATarget
XM_003540641.2	ncRNA:24   GAAAACUCUCGAAGAGAUGACCUA   1   |||*|*||||||||||||||||*| targets:2437   CUUCUAAGAGCUUCUCUACUGGUU   2460 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100793232 (LOC100793232), transcript variant X1, mRNA	uncharacterized LOC100793232(LOC100793232)	coding protein	psRNATarget
XM_006580067.2	ncRNA:24   GAAAACUCUCGAAGAGAUGACCUA   1   ||||||**|||||||||||||||* targets:581   CUUUUGUCAGCUUCUCUACUGGAA   604 Target Full Sequence	3.0	PREDICTED: Glycine max MADS-box protein FLOWERING LOCUS C (LOC100804540), transcript variant X9, mRNA	MADS-box protein FLOWERING LOCUS C(LOC100804540)	coding protein	psRNATarget
XM_006577803.2	ncRNA:24   GAAAACUCUCGAAGAGAUGACCUA   1   =||||||*|*|||||||||||||* targets:25   UUUUUGACAACUUCUCUACUGGAA   48 Target Full Sequence	3.0	PREDICTED: Glycine max homeobox protein ATH1-like (LOC100820354), transcript variant X2, mRNA	homeobox protein ATH1-like(LOC100820354)	coding protein	psRNATarget