ncRNA ID | novel_gma_miR253 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:56143049-56143135 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451629;SRR1451635;SRR1451650;SRR3160566;SRR3160568;SRR3160569;SRR1295527;SRR1451605;SRR1451610;SRR1451616;SRR1451621;SRR1451626 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCGAGAUUGGUACCUAACUGACC - 24 |
Stem-loop(if miRNA) |
--    A    -   -      C   -    GUCA     AUAAU   AUCG GAUU GGU ACCUAA UGA CCGG    AUUGU     C   |||| |||| ||| |||||| ||| ||||    |||||   UGGC CUAG CCA UGGAUU GCU GGUC    UGAUA     A GC    C    G   C      A   A    AAAG     ACUUA |
Stem-loop sequence | AUCGAGAUUGGUACCUAACUGACCGGGUCAAUUGUAUAAUCAAUUCAAUAGUGAAACUGGAUCGAUUAGGUCACCGGAUCCCGGUCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003516705.3 |
|
0.0 | PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g22670, mitochondrial-like (LOC100808343), mRNA | pentatricopeptide repeat-containing protein At3g22670, mitochondrial-like(LOC100808343) | coding protein | psRNATarget |