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BaseInfo

ncRNA ID novel_gma_miR232
Species Glycine max
Class miRNA
Genome position Chr14:30935430-30935512 [+]
Reference genome Glycine_max_v2.0
Source SRR1451629
Length 24
Mature sequence(if miRNA) 60 - AACUAUAUGGACUAAAAGAGAAUU - 83
Stem-loop(if miRNA) --              CUC    A            C     U
  UUUUCUUUUAGUCC   UAUA UUUGAAAGUGAU AUUUU G
  ||||||||||||||   |||| |||||||||||| |||||
  AAGAGAAAAUCAGG   AUAU AAACUUUCACUA UAAAA U
UU              --U    C            -     A
Stem-loop sequence UUUUCUUUUAGUCCCUCUAUAAUUUGAAAGUGAUCAUUUUUGUAAAAAUAUCACUUUCAAACUAUAUGGACUAAAAGAGAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768540.1
ncRNA:24   UUA-AGAGAAAAUCAGGUAUAUCAA   1
  |||-|=|=|||||||||*|||||||
targets:24   AAUAUUUUUUUUAGUCCUUAUAGUU   48

2.5 PREDICTED: Glycine max LRR receptor-like serine/threonine-protein kinase GSO2 (LOC106794149), mRNA LRR receptor-like serine/threonine-protein kinase GSO2(LOC106794149) coding protein psRNATarget
XM_003546240.3
ncRNA:24   UUAAGAGAAAAUCAGGUAUAUCAA   1
  |=|*||*|||||||||||=|||||
targets:2505   AGUCCUAUUUUAGUCCAUGUAGUU   2528

2.5 PREDICTED: Glycine max twinkle homolog protein, chloroplastic/mitochondrial-like (LOC100779625), mRNA twinkle homolog protein, chloroplastic/mitochondrial-like(LOC100779625) coding protein psRNATarget