ncRNA ID | novel_gma_miR232 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:30935430-30935512 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451629 |
Length | 24 |
Mature sequence(if miRNA) | 60 - AACUAUAUGGACUAAAAGAGAAUU - 83 |
Stem-loop(if miRNA) |
--              CUC    A            C     U   UUUUCUUUUAGUCC   UAUA UUUGAAAGUGAU AUUUU G   ||||||||||||||   |||| |||||||||||| |||||   AAGAGAAAAUCAGG   AUAU AAACUUUCACUA UAAAA U UU              --U    C            -     A |
Stem-loop sequence | UUUUCUUUUAGUCCCUCUAUAAUUUGAAAGUGAUCAUUUUUGUAAAAAUAUCACUUUCAAACUAUAUGGACUAAAAGAGAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014768540.1 |
|
2.5 | PREDICTED: Glycine max LRR receptor-like serine/threonine-protein kinase GSO2 (LOC106794149), mRNA | LRR receptor-like serine/threonine-protein kinase GSO2(LOC106794149) | coding protein | psRNATarget | |||||||||
XM_003546240.3 |
|
2.5 | PREDICTED: Glycine max twinkle homolog protein, chloroplastic/mitochondrial-like (LOC100779625), mRNA | twinkle homolog protein, chloroplastic/mitochondrial-like(LOC100779625) | coding protein | psRNATarget |